RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 DAGLBQ8NCG7 672 aa34.4■■■■□ 3.1
SSSCA1-207ENST00000533115 MYLIPQ8WY64 445 aa34.4■■■■□ 3.1
SSSCA1-207ENST00000533115 UIMC1Q96RL1 719 aa34.4■■■■□ 3.1
SSSCA1-207ENST00000533115 TBC1D22BQ9NU19 505 aa34.4■■■■□ 3.1
SSSCA1-207ENST00000533115 KCNJ6P48051 423 aa34.39■■■■□ 3.1
SSSCA1-207ENST00000533115 USP11P51784 963 aa34.39■■■■□ 3.1
SSSCA1-207ENST00000533115 NEK4P51957 841 aa34.39■■■■□ 3.1
SSSCA1-207ENST00000533115 TCTN1Q2MV58 587 aa34.39■■■■□ 3.1
SSSCA1-207ENST00000533115 ABHD15Q6UXT9 468 aa34.39■■■■□ 3.1
SSSCA1-207ENST00000533115 C22orf23Q9BZE7 217 aa34.39■■■■□ 3.1
SSSCA1-207ENST00000533115 IGKV6D-21A0A0A0MT36 114 aa34.38■■■■□ 3.09
SSSCA1-207ENST00000533115 EDIL3O43854 480 aa34.38■■■■□ 3.09
SSSCA1-207ENST00000533115 TNPO1Q92973 898 aaKnown RBP34.38■■■■□ 3.09
SSSCA1-207ENST00000533115 LENG9Q96B70 501 aa34.38■■■■□ 3.09
SSSCA1-207ENST00000533115 SLC28A3Q9HAS3 691 aa34.38■■■■□ 3.09
SSSCA1-207ENST00000533115 TUBE1Q9UJT0 475 aa34.38■■■■□ 3.09
SSSCA1-207ENST00000533115 MBLAC1A4D2B0 266 aaPredicted RBP34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 M0R2N6 131 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 CTDNEP1O95476 244 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 CTSHP09668 335 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 INSRRP14616 1297 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 MYOGP15173 224 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 WDR5P61964 334 aaKnown RBP34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 PLCB4Q15147 1175 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 NPY5RQ15761 445 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 MARCH8Q5T0T0 291 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 TAF2Q6P1X5 1199 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 RUFY4Q6ZNE9 571 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 TBCKQ8TEA7 893 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 TRPC6Q9Y210 931 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 CHD9Q3L8U1 2897 aa34.37■■■■□ 3.09
SSSCA1-207ENST00000533115 ABHD14A-ACY1A0A1B0GW23 586 aa34.36■■■■□ 3.09
SSSCA1-207ENST00000533115 RRN3P2A6NIE6 340 aa34.36■■■■□ 3.09
SSSCA1-207ENST00000533115 SLC26A2P50443 739 aa34.36■■■■□ 3.09
SSSCA1-207ENST00000533115 IKBKEQ14164 716 aa34.36■■■■□ 3.09
SSSCA1-207ENST00000533115 ME3Q16798 604 aa34.36■■■■□ 3.09
SSSCA1-207ENST00000533115 RPAINQ86UA6 219 aa34.36■■■■□ 3.09
SSSCA1-207ENST00000533115 HERC6Q8IVU3 1022 aa34.36■■■■□ 3.09
SSSCA1-207ENST00000533115 BACH1O14867 736 aa34.35■■■■□ 3.09
SSSCA1-207ENST00000533115 EFCAB14O75071 495 aa34.35■■■■□ 3.09
SSSCA1-207ENST00000533115 IGBP1P78318 339 aa34.35■■■■□ 3.09
SSSCA1-207ENST00000533115 FAM26DQ5JW98 314 aa34.35■■■■□ 3.09
SSSCA1-207ENST00000533115 FAM160B1Q5W0V3 765 aa34.35■■■■□ 3.09
SSSCA1-207ENST00000533115 MIS18BP1Q6P0N0 1132 aa34.35■■■■□ 3.09
SSSCA1-207ENST00000533115 KCNJ14Q9UNX9 436 aa34.35■■■■□ 3.09
SSSCA1-207ENST00000533115 RBAK-RBAKDNI3L0D1 243 aa34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 LARGE1O95461 756 aa34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 FOSL2P15408 326 aa34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 XBP1P17861 261 aa34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 ZNF746Q6NUN9 644 aaPredicted RBP34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 NECAB1Q8N987 351 aa34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 DBF4BQ8NFT6 615 aa34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 GTF3C6Q969F1 213 aa34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 PHF20Q9BVI0 1012 aa34.34■■■■□ 3.09
SSSCA1-207ENST00000533115 POTEB3A0JP26 581 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 DTNBO60941 627 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 KRT76Q01546 638 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 C8orf34Q49A92 452 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 PLEKHG4Q58EX7 1191 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 POTEBQ6S5H4 581 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 RSPH3Q86UC2 560 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 CCDC60Q8IWA6 550 aaPredicted RBP34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 ZNF302Q9NR11 478 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 TCEAL9Q9UHQ7 104 aa34.33■■■■□ 3.09
SSSCA1-207ENST00000533115 KIF28PB7ZC32 967 aa34.32■■■■□ 3.08
SSSCA1-207ENST00000533115 MSH4O15457 936 aa34.32■■■■□ 3.08
SSSCA1-207ENST00000533115 DEFB103AP81534 67 aa34.32■■■■□ 3.08
SSSCA1-207ENST00000533115 PPP2R2DQ66LE6 453 aa34.32■■■■□ 3.08
SSSCA1-207ENST00000533115 SWSAP1Q6NVH7 229 aa34.32■■■■□ 3.08
SSSCA1-207ENST00000533115 SMAP1Q8IYB5 467 aaPredicted RBP34.32■■■■□ 3.08
SSSCA1-207ENST00000533115 OSBPL7Q9BZF2 842 aa34.32■■■■□ 3.08
SSSCA1-207ENST00000533115 ORC3Q9UBD5 711 aaPredicted RBP34.32■■■■□ 3.08
SSSCA1-207ENST00000533115 KRT25Q7Z3Z0 450 aa34.31■■■■□ 3.08
SSSCA1-207ENST00000533115 WASF1Q92558 559 aa34.31■■■■□ 3.08
SSSCA1-207ENST00000533115 PTPRSQ13332 1948 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 CHRNA1P02708 482 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 CA3P07451 260 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 NONOQ15233 471 aaKnown RBP eCLIP34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 Q4G0T1 1027 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 PDXDC2PQ6P474 469 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 DNAJB3Q8WWF6 145 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 SEPT8Q92599 483 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 ZBTB10Q96DT7 871 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 PRDM12Q9H4Q4 367 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 PCDHA10Q9Y5I2 948 aa34.3■■■■□ 3.08
SSSCA1-207ENST00000533115 CYP3A7-CYP3A51PA0A087WV96 503 aa34.29■■■■□ 3.08
SSSCA1-207ENST00000533115 RPLP2P05387 115 aaKnown RBP34.29■■■■□ 3.08
SSSCA1-207ENST00000533115 PSAPP07602 524 aa34.29■■■■□ 3.08
SSSCA1-207ENST00000533115 CYP3A7P24462 503 aa34.29■■■■□ 3.08
SSSCA1-207ENST00000533115 ATP8B4Q8TF62 1192 aa34.29■■■■□ 3.08
SSSCA1-207ENST00000533115 TRAPPC12Q8WVT3 735 aa34.29■■■■□ 3.08
SSSCA1-207ENST00000533115 RIT2Q99578 217 aa34.29■■■■□ 3.08
SSSCA1-207ENST00000533115 GJB4Q9NTQ9 266 aa34.29■■■■□ 3.08
SSSCA1-207ENST00000533115 HBP1O60381 514 aa34.28■■■■□ 3.08
SSSCA1-207ENST00000533115 FDPSP14324 419 aaKnown RBP34.28■■■■□ 3.08
SSSCA1-207ENST00000533115 MGAT3Q09327 533 aa34.28■■■■□ 3.08
SSSCA1-207ENST00000533115 MKRN4PQ13434 485 aaPredicted RBP34.28■■■■□ 3.08
SSSCA1-207ENST00000533115 TMCO2Q7Z6W1 182 aaPredicted RBP34.28■■■■□ 3.08
SSSCA1-207ENST00000533115 SLC17A8Q8NDX2 589 aa34.28■■■■□ 3.08
SSSCA1-207ENST00000533115 MAFAQ8NHW3 353 aaPredicted RBP34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms