RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 LAMC2Q13753 1193 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 ZSCAN23Q3MJ62 389 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 MFSD14CQ5VZR4 134 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 MIS18BP1Q6P0N0 1132 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 CNNM4Q6P4Q7 775 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 DHX37Q8IY37 1157 aaKnown RBP16.55■□□□□ 0.24
NXF1-214ENST00000533048 C4orf19Q8IY42 314 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 LARP4BQ92615 738 aaKnown RBP16.55■□□□□ 0.24
NXF1-214ENST00000533048 RAD54LQ92698 747 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 ANP32EQ9BTT0 268 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 WRAP73Q9P2S5 460 aaPredicted RBP16.55■□□□□ 0.24
NXF1-214ENST00000533048 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
NXF1-214ENST00000533048 KIAA1024Q9UPX6 916 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 GNEQ9Y223 722 aaKnown RBP16.55■□□□□ 0.24
NXF1-214ENST00000533048 TELO2Q9Y4R8 837 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 SAMM50Q9Y512 469 aa16.55■□□□□ 0.24
NXF1-214ENST00000533048 EMSYQ7Z589 1322 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.54■□□□□ 0.24
NXF1-214ENST00000533048 GSTTP1A0A1W2PQM5 241 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 ADCY6O43306 1168 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 SMPD1P17405 629 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 CTTNQ14247 550 aaKnown RBP16.54■□□□□ 0.24
NXF1-214ENST00000533048 POSTNQ15063 836 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 ZRSR1Q15695 479 aaKnown RBP16.54■□□□□ 0.24
NXF1-214ENST00000533048 TMEM63BQ5T3F8 832 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 MAP3K21Q5TCX8 1036 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 CCDC60Q8IWA6 550 aaPredicted RBP16.54■□□□□ 0.24
NXF1-214ENST00000533048 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 SPATA20Q8TB22 786 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 AFAP1L1Q8TED9 768 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 SEPT1Q8WYJ6 367 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 ATP6V0A1Q93050 837 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 PLIN2Q99541 437 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 GPR20Q99678 358 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 MLXIPQ9HAP2 919 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 Q9Y3F1 56 aa16.54■□□□□ 0.24
NXF1-214ENST00000533048 DKC1O60832 514 aaKnown RBP eCLIP16.53■□□□□ 0.24
NXF1-214ENST00000533048 LGR5O75473 907 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 EYA4O95677 639 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 HMGCRP04035 888 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 XRCC6P12956 609 aaKnown RBP eCLIP16.53■□□□□ 0.24
NXF1-214ENST00000533048 CAMK4Q16566 473 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 UGCGQ16739 394 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 HSDL1Q3SXM5 330 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 PRAMEF19Q5SWL8 479 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 NT5DC1Q5TFE4 455 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 TPH2Q8IWU9 490 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 BANK1Q8NDB2 785 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 TRPV1Q8NER1 839 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 COPS5Q92905 334 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 NACC1Q96RE7 527 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 TUBE1Q9UJT0 475 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 DNM3Q9UQ16 869 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 MAFBQ9Y5Q3 323 aaPredicted RBP16.53■□□□□ 0.24
NXF1-214ENST00000533048 ARID2Q68CP9 1835 aa16.53■□□□□ 0.24
NXF1-214ENST00000533048 CEP350Q5VT06 3117 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 E9PMD0 336 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 FOXN1O15353 648 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 GTPBP6O43824 516 aaPredicted RBP16.52■□□□□ 0.24
NXF1-214ENST00000533048 ADCY3O60266 1144 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 AKR1A1P14550 325 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 TCF7P36402 384 aaPredicted RBP16.52■□□□□ 0.24
NXF1-214ENST00000533048 SLC12A3P55017 1021 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 ZNF445P59923 1031 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 TNFAIP2Q03169 654 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 DPYDQ12882 1025 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 SYT2Q8N9I0 419 aaPredicted RBP16.52■□□□□ 0.24
NXF1-214ENST00000533048 SLAIN1Q8ND83 568 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 SPATA33Q96N06 139 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 PCYT2Q99447 389 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 LRRC27Q9C0I9 530 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 KIAA1468Q9P260 1216 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 TSKSQ9UJT2 592 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
NXF1-214ENST00000533048 FAM184BQ9ULE4 1060 aa16.52■□□□□ 0.24
NXF1-214ENST00000533048 NOP56O00567 594 aaKnown RBP16.51■□□□□ 0.23
NXF1-214ENST00000533048 ZNF862O60290 1169 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 STBD1O95210 358 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 PLA2G4BP0C869 781 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 SARSP49591 514 aaKnown RBP16.51■□□□□ 0.23
NXF1-214ENST00000533048 SLC26A2P50443 739 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 PSMC6P62333 389 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 NKX3-2P78367 333 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 AMPD3Q01432 767 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 SP4Q02446 784 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 CACNB2Q08289 660 aaPredicted RBP16.51■□□□□ 0.23
NXF1-214ENST00000533048 PNOCQ13519 176 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 MCM6Q14566 821 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 GJC2Q5T442 439 aaPredicted RBP16.51■□□□□ 0.23
NXF1-214ENST00000533048 SWSAP1Q6NVH7 229 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 SV2BQ7L1I2 683 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 GRAMD1CQ8IYS0 662 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 RAET1EQ8TD07 263 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 C7orf25Q9BPX7 421 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 TRIM9Q9C026 710 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 ZNF302Q9NR11 478 aa16.51■□□□□ 0.23
NXF1-214ENST00000533048 ANKEF1Q9NU02 776 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms