RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PPP2R2DQ66LE6 453 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 TAF2Q6P1X5 1199 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 RSPH3Q86UC2 560 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 PCYT2Q99447 389 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 ZBED2Q9BTP6 218 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 PRDM12Q9H4Q4 367 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 TBC1D22BQ9NU19 505 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 TRPC6Q9Y210 931 aa19.58■□□□□ 0.72
PHRF1-204ENST00000532550 IGLV3-22A0A075B6J6 115 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 BACH1O14867 736 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 INSRRP14616 1297 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 CIITAP33076 1130 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 USP11P51784 963 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 IGBP1P78318 339 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 PRR16Q569H4 304 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 DBF4BQ8NFT6 615 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 UIMC1Q96RL1 719 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 C22orf23Q9BZE7 217 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 TCEAL9Q9UHQ7 104 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 TUBE1Q9UJT0 475 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 TPCN1Q9ULQ1 816 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 PCDHA4Q9UN74 947 aa19.57■□□□□ 0.72
PHRF1-204ENST00000532550 DHX15O43143 795 aaKnown RBP19.56■□□□□ 0.72
PHRF1-204ENST00000532550 TLL1O43897 1013 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 CA3P07451 260 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 SLC26A2P50443 739 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 SCRN1Q12765 414 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 PLCB4Q15147 1175 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 PLEKHG4Q58EX7 1191 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 FAM160B1Q5W0V3 765 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 MIS18BP1Q6P0N0 1132 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 ABHD15Q6UXT9 468 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 FAM177A1Q8N128 213 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-204ENST00000532550 SEPT8Q92599 483 aa19.56■□□□□ 0.72
PHRF1-204ENST00000532550 PFKFB2O60825 505 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 CCNE2O96020 404 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 AK2P54819 239 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 TCTN1Q2MV58 587 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 FAM26DQ5JW98 314 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 MARCH8Q5T0T0 291 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 GALNT17Q6IS24 598 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 RUFY4Q6ZNE9 571 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 RPAINQ86UA6 219 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 BLIDQ8IZY5 108 aa19.55■□□□□ 0.72
PHRF1-204ENST00000532550 IGKV6D-21A0A0A0MT36 114 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 POTEB3A0JP26 581 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 MBLAC1A4D2B0 266 aaPredicted RBP19.54■□□□□ 0.72
PHRF1-204ENST00000532550 XBP1P17861 261 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 DEFB103AP81534 67 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 SWSAP1Q6NVH7 229 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 POTEBQ6S5H4 581 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 TBCKQ8TEA7 893 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 DNAJB3Q8WWF6 145 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 AIFM3Q96NN9 605 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 ZNF302Q9NR11 478 aa19.54■□□□□ 0.72
PHRF1-204ENST00000532550 CHRNA1P02708 482 aa19.53■□□□□ 0.72
PHRF1-204ENST00000532550 AMHP03971 560 aa19.53■□□□□ 0.72
PHRF1-204ENST00000532550 RPLP2P05387 115 aaKnown RBP19.53■□□□□ 0.72
PHRF1-204ENST00000532550 IGFBP4P22692 258 aa19.53■□□□□ 0.72
PHRF1-204ENST00000532550 NEK4P51957 841 aa19.53■□□□□ 0.72
PHRF1-204ENST00000532550 KRT76Q01546 638 aa19.53■□□□□ 0.72
PHRF1-204ENST00000532550 ZNF746Q6NUN9 644 aaPredicted RBP19.53■□□□□ 0.72
PHRF1-204ENST00000532550 PDXDC2PQ6P474 469 aa19.53■□□□□ 0.72
PHRF1-204ENST00000532550 TMCO2Q7Z6W1 182 aaPredicted RBP19.53■□□□□ 0.72
PHRF1-204ENST00000532550 IL17RAQ96F46 866 aa19.53■□□□□ 0.72
PHRF1-204ENST00000532550 PCDHA10Q9Y5I2 948 aa19.53■□□□□ 0.72
PHRF1-204ENST00000532550 HBP1O60381 514 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 GJB5O95377 273 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 SEC24BO95487 1268 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 PSAPP07602 524 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 IER5Q5VY09 327 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 FAM117BQ6P1L5 589 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.52■□□□□ 0.72
PHRF1-204ENST00000532550 SMAP1Q8IYB5 467 aaPredicted RBP19.52■□□□□ 0.72
PHRF1-204ENST00000532550 DAGLBQ8NCG7 672 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 APBB2Q92870 758 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 RAD9AQ99638 391 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 SAMM50Q9Y512 469 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 PCDHA2Q9Y5H9 948 aa19.52■□□□□ 0.72
PHRF1-204ENST00000532550 TAP1Q03518 808 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 CCDC60Q8IWA6 550 aaPredicted RBP19.51■□□□□ 0.71
PHRF1-204ENST00000532550 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.51■□□□□ 0.71
PHRF1-204ENST00000532550 CKAP2LQ8IYA6 745 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 ATP8B4Q8TF62 1192 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 TRAPPC12Q8WVT3 735 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 WASF1Q92558 559 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 LENG9Q96B70 501 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 IFIH1Q9BYX4 1025 aaKnown RBP19.51■□□□□ 0.71
PHRF1-204ENST00000532550 OSBPL7Q9BZF2 842 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 FAM49AQ9H0Q0 323 aaPredicted RBP19.51■□□□□ 0.71
PHRF1-204ENST00000532550 CERS4Q9HA82 394 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 KCNJ14Q9UNX9 436 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 MYH9P35579 1960 aaKnown RBP19.51■□□□□ 0.71
PHRF1-204ENST00000532550 STK36Q9NRP7 1315 aa19.51■□□□□ 0.71
PHRF1-204ENST00000532550 RBAK-RBAKDNI3L0D1 243 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 M0QZ92 97 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 M0R2N6 131 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 MSH4O15457 936 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 EDIL3O43854 480 aa19.5■□□□□ 0.71
PHRF1-204ENST00000532550 MRPS6P82932 125 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms