RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	UPK3BL1	B0FP48	263 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	UPK3BL2	E5RIL1	263 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	ANXA1	P04083	346 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	GJB1	P08034	283 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	CHMP4BP1	P59074	171 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	TNK2	Q07912	1038 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	LRIT3	Q3SXY7	679 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	DEFB123	Q8N688	67 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	LRRN4CL	Q8ND94	238 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	PPP1R13L	Q8WUF5	828 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	FAM89A	Q96GI7	184 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	CCDC120	Q96HB5	630 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	GDF15	Q99988	308 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	MXD3	Q9BW11	206 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	TRIT1	Q9H3H1	467 aa	Known RBP	7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	NUDC	Q9Y266	331 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	ALPK3	Q96L96	1907 aa		7.28	□□□□□ -1.24
PUM1-222	ENST00000531867	XDH	P47989	1333 aa		7.27	□□□□□ -1.24
PUM1-222	ENST00000531867	SASH1	O94885	1247 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	ATE1	O95260	518 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	CAPN2	P17655	700 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	LACTB	P83111	547 aa	Predicted RBP	7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	APOBR	Q0VD83	1088 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	TMPRSS7	Q7RTY8	843 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	KIAA0825	Q8IV33	1275 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	PHACTR4	Q8IZ21	702 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	REXO1	Q8N1G1	1221 aa	Known RBP	7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	PLBD2	Q8NHP8	589 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	BRI3BP	Q8WY22	251 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	NT5C1A	Q9BXI3	368 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	ASPN	Q9BXN1	380 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	BACH2	Q9BYV9	841 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	ARHGAP39	Q9C0H5	1083 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	BRMS1	Q9HCU9	246 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	ATP13A1	Q9HD20	1204 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	BABAM1	Q9NWV8	329 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	STAP2	Q9UGK3	403 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	PCDHB14	Q9Y5E9	798 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	MED23	Q9ULK4	1368 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	ZNF804B	A4D1E1	1349 aa		7.27	□□□□□ -1.25
PUM1-222	ENST00000531867	CHURC1-FNTB	B4DL54	471 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	IRS4	O14654	1257 aa	Predicted RBP	7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	TLR2	O60603	784 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	PAPLN	O95428	1278 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	EIF2S2	P20042	333 aa	Known RBP	7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	FANCC	Q00597	558 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	AIMP1	Q12904	312 aa	Known RBP	7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	SUPT20HL1	Q3ZLR7	823 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	FAM43A	Q8N2R8	423 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867		Q96M66	194 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	CFAP53	Q96M91	514 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	PLEKHF1	Q96S99	279 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	COA1	Q9GZY4	146 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	CARS2	Q9HA77	564 aa	Known RBP	7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	ZCCHC17	Q9NP64	241 aa	Known RBP	7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	GMIP	Q9P107	970 aa		7.26	□□□□□ -1.25
PUM1-222	ENST00000531867	UNC80	Q8N2C7	3258 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	CCL5	P13501	91 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	RAG1	P15918	1043 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	CTGF	P29279	349 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	CRK	P46108	304 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	ZNF165	P49910	485 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.25	□□□□□ -1.25
PUM1-222	ENST00000531867		Q7L0L9	218 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	CERS3	Q8IU89	383 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	DTWD2	Q8NBA8	298 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	RNF34	Q969K3	372 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	UBE2F	Q969M7	185 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	OPTN	Q96CV9	577 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	SPON2	Q9BUD6	331 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	EHMT1	Q9H9B1	1298 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	GPATCH2	Q9NW75	528 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	UBP1	Q9NZI7	540 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	ZSWIM5	Q9P217	1185 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	SRRD	Q9UH36	339 aa		7.25	□□□□□ -1.25
PUM1-222	ENST00000531867	CCL15-CCL14	A0A0B4J2E2	113 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	RGS13	O14921	159 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	MARCH6	O60337	910 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	FARP2	O94887	1054 aa	Predicted RBP	7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	SGPL1	O95470	568 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	GTF2A2	P52657	109 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	RNF4	P78317	190 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	HDLBP	Q00341	1268 aa	Known RBP	7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	KIF22	Q14807	665 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	NFE2L2	Q16236	605 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	CCL15	Q16663	113 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	SEZ6	Q53EL9	994 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	TTLL5	Q6EMB2	1281 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	C17orf99	Q6UX52	265 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	SLITRK4	Q8IW52	837 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	U2AF1L4	Q8WU68	220 aa	Known RBP	7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	NKD1	Q969G9	470 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	KREMEN1	Q96MU8	473 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	DNAJC2	Q99543	621 aa	Known RBP	7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	GPR62	Q9BZJ7	368 aa		7.24	□□□□□ -1.25
PUM1-222	ENST00000531867	PRDM7	Q9NQW5	492 aa		7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms