RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 TRPC6Q9Y210 931 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 NRCAMQ92823 1304 aa16.38■□□□□ 0.21
FOXR1-202ENST00000531539 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 CCNT1O60563 726 aaKnown RBP16.37■□□□□ 0.21
FOXR1-202ENST00000531539 GAS7O60861 476 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 PSAPP07602 524 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 INSRRP14616 1297 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 RFC2P35250 354 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
FOXR1-202ENST00000531539 KRT76Q01546 638 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 PLCB4Q15147 1175 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 GRIK4Q16099 956 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 TRIM71Q2Q1W2 868 aaKnown RBP16.37■□□□□ 0.21
FOXR1-202ENST00000531539 ZNF618Q5T7W0 954 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 LRCH2Q5VUJ6 765 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 ZNF746Q6NUN9 644 aaPredicted RBP16.37■□□□□ 0.21
FOXR1-202ENST00000531539 LRRC8DQ7L1W4 858 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 TRMT1LQ7Z2T5 733 aaKnown RBP16.37■□□□□ 0.21
FOXR1-202ENST00000531539 DIS3L2Q8IYB7 885 aaKnown RBP16.37■□□□□ 0.21
FOXR1-202ENST00000531539 IL27Q8NEV9 243 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 LMBR1Q8WVP7 490 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 SLC5A5Q92911 643 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
FOXR1-202ENST00000531539 C8orf76Q96K31 380 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 RIT2Q99578 217 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 TEKT3Q9BXF9 490 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 PCDHA10Q9Y5I2 948 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 EMSYQ7Z589 1322 aa16.37■□□□□ 0.21
FOXR1-202ENST00000531539 IGKV6D-21A0A0A0MT36 114 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 POTEB3A0JP26 581 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 RRN3P2A6NIE6 340 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 CHMP2AO43633 222 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 MARCH6O60337 910 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
FOXR1-202ENST00000531539 HOXC8P31273 242 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 ADAM17P78536 824 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 SAFBQ15424 915 aaKnown RBP eCLIP16.36■□□□□ 0.21
FOXR1-202ENST00000531539 PDXDC2PQ6P474 469 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 POTEBQ6S5H4 581 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 MOXD1Q6UVY6 613 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 CKAP2LQ8IYA6 745 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 HERVK_113Q902F9 699 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 VWCEQ96DN2 955 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 TMX3Q96JJ7 454 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
FOXR1-202ENST00000531539 TRIP12Q14669 1992 aaPredicted RBP16.35■□□□□ 0.21
FOXR1-202ENST00000531539 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.35■□□□□ 0.21
FOXR1-202ENST00000531539 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.35■□□□□ 0.21
FOXR1-202ENST00000531539 ZBBXA8MT70 800 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 RSPH10B2B2RC85 870 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 RSPH10BP0C881 870 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 PPP4R3AQ6IN85 833 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 CCDC60Q8IWA6 550 aaPredicted RBP16.35■□□□□ 0.21
FOXR1-202ENST00000531539 SMAP1Q8IYB5 467 aaPredicted RBP16.35■□□□□ 0.21
FOXR1-202ENST00000531539 TNFRSF25Q93038 417 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 ZBTB10Q96DT7 871 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 NAP1L4Q99733 375 aaKnown RBP16.35■□□□□ 0.21
FOXR1-202ENST00000531539 UNC45AQ9H3U1 944 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 DISC1Q9NRI5 854 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 CXXC1Q9P0U4 656 aaPredicted RBP16.35■□□□□ 0.21
FOXR1-202ENST00000531539 GABBR1Q9UBS5 961 aa16.35■□□□□ 0.21
FOXR1-202ENST00000531539 RANBP2P49792 3224 aaKnown RBP16.34■□□□□ 0.21
FOXR1-202ENST00000531539 WDR64B1ANS9 1081 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 RBAK-RBAKDNI3L0D1 243 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 SLC37A4O43826 429 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 PSMD10O75832 226 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 PFKMP08237 780 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 ACTN1P12814 892 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 GCFC2P16383 781 aaKnown RBP16.34■□□□□ 0.21
FOXR1-202ENST00000531539 ATP2B1P20020 1258 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 ATP4AP20648 1035 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 MCM2P49736 904 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 SLC26A2P50443 739 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 RBL2Q08999 1139 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 GPNMBQ14956 572 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 MARCH8Q5T0T0 291 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 RUFY4Q6ZNE9 571 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 MIER3Q7Z3K6 550 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 TRAPPC12Q8WVT3 735 aa16.34■□□□□ 0.21
FOXR1-202ENST00000531539 MTIF3Q9H2K0 278 aaKnown RBP16.34■□□□□ 0.21
FOXR1-202ENST00000531539 GRXCR1A8MXD5 290 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 HBP1O60381 514 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 NBNO60934 754 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 BAG4O95429 457 aaKnown RBP16.33■□□□□ 0.2
FOXR1-202ENST00000531539 PARNO95453 639 aaKnown RBP16.33■□□□□ 0.2
FOXR1-202ENST00000531539 CTSHP09668 335 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
FOXR1-202ENST00000531539 RASIP1Q5U651 963 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 FAM109BQ6ICB4 259 aaPredicted RBP16.33■□□□□ 0.2
FOXR1-202ENST00000531539 TRAF7Q6Q0C0 670 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 FBXO18Q8NFZ0 1043 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 ETNPPLQ8TBG4 499 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 FAM20AQ96MK3 541 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 NRBP2Q9NSY0 501 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 TUBE1Q9UJT0 475 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.2
FOXR1-202ENST00000531539 SLC4A7Q9Y6M7 1214 aa16.33■□□□□ 0.2
FOXR1-202ENST00000531539 KLRC1P26715 233 aa16.32■□□□□ 0.2
FOXR1-202ENST00000531539 SFNP31947 248 aa16.32■□□□□ 0.2
FOXR1-202ENST00000531539 JAK3P52333 1124 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms