RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.57□□□□□ -1.2
ATM-216ENST00000531525 CBARPQ8N350 705 aaPredicted RBP7.57□□□□□ -1.2
ATM-216ENST00000531525 UTP4Q969X6 686 aaKnown RBP7.57□□□□□ -1.2
ATM-216ENST00000531525 MYRFLQ96LU7 910 aa7.57□□□□□ -1.2
ATM-216ENST00000531525 CORO1BQ9BR76 489 aa7.57□□□□□ -1.2
ATM-216ENST00000531525 NAA15Q9BXJ9 866 aaKnown RBP7.57□□□□□ -1.2
ATM-216ENST00000531525 CYP4F12Q9HCS2 524 aa7.57□□□□□ -1.2
ATM-216ENST00000531525 TCF7L1Q9HCS4 588 aa7.57□□□□□ -1.2
ATM-216ENST00000531525 POLR3AO14802 1390 aaPredicted RBP7.56□□□□□ -1.2
ATM-216ENST00000531525 HIP1RO75146 1068 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 MYBP10242 640 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 CALRP27797 417 aaKnown RBP7.56□□□□□ -1.2
ATM-216ENST00000531525 GRIA2P42262 883 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 ECE1P42892 770 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 MAPK9P45984 424 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 ELF2Q15723 593 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 TRIM61Q5EBN2 209 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 PRSS36Q5K4E3 855 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 PGM2L1Q6PCE3 622 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 MPRIPQ6WCQ1 1025 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 GET4Q7L5D6 327 aaPredicted RBP7.56□□□□□ -1.2
ATM-216ENST00000531525 NLRC3Q7RTR2 1065 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 MYLK4Q86YV6 388 aaPredicted RBP7.56□□□□□ -1.2
ATM-216ENST00000531525 CCT6BQ92526 530 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 LRRC27Q9C0I9 530 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 DDX21Q9NR30 783 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATM-216ENST00000531525 SAGE1Q9NXZ1 904 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 GMIPQ9P107 970 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 FNIP2Q9P278 1114 aa7.56□□□□□ -1.2
ATM-216ENST00000531525 SLC22A31A6NKX4 558 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 SART1O43290 800 aaKnown RBP7.55□□□□□ -1.2
ATM-216ENST00000531525 SNX2O60749 519 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 VDRP11473 427 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 DRD2P14416 443 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 RAG1P15918 1043 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 ARNTP27540 789 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 CCDC96Q2M329 555 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 ATP13A4Q4VNC1 1196 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 INTS3Q68E01 1043 aaKnown RBP7.55□□□□□ -1.2
ATM-216ENST00000531525 NXPE1Q8N323 547 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 SDR16C5Q8N3Y7 309 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 TTC30BQ8N4P2 665 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 TCP11L2Q8N4U5 519 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 C12orf50Q8NA57 414 aaPredicted RBP7.55□□□□□ -1.2
ATM-216ENST00000531525 TRIM63Q969Q1 353 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 HSPBAP1Q96EW2 488 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 WNK4Q96J92 1243 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 MENTQ9BUN1 341 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 VTA1Q9NP79 307 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 REV1Q9UBZ9 1251 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 USP19O94966 1318 aa7.55□□□□□ -1.2
ATM-216ENST00000531525 COL18A1P39060 1754 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 QRICH2Q9H0J4 1663 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 A0A087WZG4 1122 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 BLACEA4D250 179 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 ZNF891A8MT65 544 aaPredicted RBP7.54□□□□□ -1.2
ATM-216ENST00000531525 DHX15O43143 795 aaKnown RBP7.54□□□□□ -1.2
ATM-216ENST00000531525 TP53P04637 393 aaPredicted RBP7.54□□□□□ -1.2
ATM-216ENST00000531525 ITGAVP06756 1048 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 C6orf222P0C671 652 aaPredicted RBP7.54□□□□□ -1.2
ATM-216ENST00000531525 NAT2P11245 290 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 CCT5P48643 541 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 ODF1Q14990 250 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 KRT72Q14CN4 511 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 PDZD3Q86UT5 571 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 FAM20CQ8IXL6 584 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 OSBP2Q969R2 916 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 SCLYQ96I15 445 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 SLC13A1Q9BZW2 595 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 KLHL3Q9UH77 587 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 ZNF214Q9UL59 606 aaPredicted RBP7.54□□□□□ -1.2
ATM-216ENST00000531525 RAXQ9Y2V3 346 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 SLC4A7Q9Y6M7 1214 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 KIAA1210Q9ULL0 1709 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 RGPD5Q99666 1765 aa7.54□□□□□ -1.2
ATM-216ENST00000531525 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 CTNND1O60716 968 aaKnown RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 GSTP1P09211 210 aaKnown RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 FGFR1P11362 822 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 BMP3P12645 472 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 HSPA6P17066 643 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 DDIT3P35638 169 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 CRB1P82279 1406 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 SOX4Q06945 474 aaPredicted RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 IFIT1BQ5T764 474 aaKnown RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 MAP1SQ66K74 1059 aaPredicted RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 MZT2AQ6P582 158 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 RSRC2Q7L4I2 434 aaKnown RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 NKAPQ8N5F7 415 aaKnown RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 AHCYL2Q96HN2 611 aaKnown RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 FAXDC2Q96IV6 333 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 MAGEB10Q96LZ2 347 aaPredicted RBP7.53□□□□□ -1.2
ATM-216ENST00000531525 EMILIN2Q9BXX0 1053 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 PAPPAQ13219 1627 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 PIK3C2AO00443 1686 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 NHSQ6T4R5 1651 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 SLIT3O75094 1523 aa7.53□□□□□ -1.2
ATM-216ENST00000531525 ANKRD34BA5PLL1 514 aa7.52□□□□□ -1.2
ATM-216ENST00000531525 EFCAB14O75071 495 aa7.52□□□□□ -1.2
ATM-216ENST00000531525 RBP3P10745 1247 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms