RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 DPYSL5Q9BPU6 564 aa7.5□□□□□ -1.21
PTPRK-220ENST00000531466 OAZ3Q9UMX2 235 aa7.5□□□□□ -1.21
PTPRK-220ENST00000531466 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
PTPRK-220ENST00000531466 NARSO43776 548 aaKnown RBP7.49□□□□□ -1.21
PTPRK-220ENST00000531466 KIZQ2M2Z5 673 aa7.49□□□□□ -1.21
PTPRK-220ENST00000531466 LSM12Q3MHD2 195 aaKnown RBP7.49□□□□□ -1.21
PTPRK-220ENST00000531466 VPS37DQ86XT2 251 aa7.49□□□□□ -1.21
PTPRK-220ENST00000531466 OR14A2Q96R54 314 aa7.49□□□□□ -1.21
PTPRK-220ENST00000531466 CD244Q9BZW8 370 aa7.49□□□□□ -1.21
PTPRK-220ENST00000531466 PDGFDQ9GZP0 370 aaPredicted RBP7.49□□□□□ -1.21
PTPRK-220ENST00000531466 CR2P20023 1033 aa7.48□□□□□ -1.21
PTPRK-220ENST00000531466 POLD1P28340 1107 aa7.48□□□□□ -1.21
PTPRK-220ENST00000531466 EPHA5P54756 1037 aa7.48□□□□□ -1.21
PTPRK-220ENST00000531466 DCAF4Q8WV16 495 aa7.48□□□□□ -1.21
PTPRK-220ENST00000531466 TRIM8Q9BZR9 551 aa7.48□□□□□ -1.21
PTPRK-220ENST00000531466 WDR33Q9C0J8 1336 aaKnown RBP7.48□□□□□ -1.21
PTPRK-220ENST00000531466 PRODHO43272 600 aa7.47□□□□□ -1.21
PTPRK-220ENST00000531466 CDC14BO60729 498 aa7.47□□□□□ -1.21
PTPRK-220ENST00000531466 SOD2P04179 222 aa7.47□□□□□ -1.21
PTPRK-220ENST00000531466 TOP3AQ13472 1001 aaPredicted RBP7.47□□□□□ -1.21
PTPRK-220ENST00000531466 NTRK3Q16288 839 aa7.47□□□□□ -1.21
PTPRK-220ENST00000531466 POLNQ7Z5Q5 900 aa7.47□□□□□ -1.21
PTPRK-220ENST00000531466 C1orf210Q8IVY1 113 aa7.47□□□□□ -1.21
PTPRK-220ENST00000531466 IKZF4Q9H2S9 585 aa7.47□□□□□ -1.21
PTPRK-220ENST00000531466 ST7Q9NRC1 585 aa7.47□□□□□ -1.21
PTPRK-220ENST00000531466 BLACEA4D250 179 aa7.46□□□□□ -1.22
PTPRK-220ENST00000531466 CUTAO60888 179 aa7.46□□□□□ -1.22
PTPRK-220ENST00000531466 C1SP09871 688 aa7.46□□□□□ -1.22
PTPRK-220ENST00000531466 MCM7P33993 719 aa7.46□□□□□ -1.22
PTPRK-220ENST00000531466 HSP90AA2PQ14568 343 aaPredicted RBP7.46□□□□□ -1.22
PTPRK-220ENST00000531466 SMN1Q16637 294 aaKnown RBP7.46□□□□□ -1.22
PTPRK-220ENST00000531466 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTPRK-220ENST00000531466 C12orf65Q9H3J6 166 aaKnown RBP7.46□□□□□ -1.22
PTPRK-220ENST00000531466 IPPKQ9H8X2 491 aa7.46□□□□□ -1.22
PTPRK-220ENST00000531466 ZNF408Q9H9D4 720 aa7.46□□□□□ -1.22
PTPRK-220ENST00000531466 NR2E1Q9Y466 385 aa7.46□□□□□ -1.22
PTPRK-220ENST00000531466 SLC30A1Q9Y6M5 507 aa7.46□□□□□ -1.22
PTPRK-220ENST00000531466 INHBEP58166 350 aa7.45□□□□□ -1.22
PTPRK-220ENST00000531466 GPR85P60893 370 aa7.45□□□□□ -1.22
PTPRK-220ENST00000531466 DBPQ10586 325 aaPredicted RBP7.45□□□□□ -1.22
PTPRK-220ENST00000531466 CEP89Q96ST8 783 aa7.45□□□□□ -1.22
PTPRK-220ENST00000531466 AARSD1Q9BTE6 412 aaKnown RBP7.45□□□□□ -1.22
PTPRK-220ENST00000531466 PLA2G12BQ9BX93 195 aa7.45□□□□□ -1.22
PTPRK-220ENST00000531466 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.44□□□□□ -1.22
PTPRK-220ENST00000531466 UNCXA6NJT0 531 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 FAM47E-STBD1D6RA91 191 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 MATN2O00339 956 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 WDR72Q3MJ13 1102 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 ZMAT1Q5H9K5 638 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 IFNL3Q8IZI9 196 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 ZNF808Q8N4W9 903 aaPredicted RBP7.44□□□□□ -1.22
PTPRK-220ENST00000531466 CELF2-AS1Q8N7Q2 184 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 IL17DQ8TAD2 202 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.44□□□□□ -1.22
PTPRK-220ENST00000531466 SH3RF2Q8TEC5 729 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 NEU4Q8WWR8 484 aaPredicted RBP7.44□□□□□ -1.22
PTPRK-220ENST00000531466 OSBP2Q969R2 916 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 FAM89AQ96GI7 184 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 PLEKHG4BQ96PX9 1271 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 ARHGEF4Q9NR80 690 aa7.44□□□□□ -1.22
PTPRK-220ENST00000531466 PABPC1P11940 636 aaKnown RBP7.43□□□□□ -1.22
PTPRK-220ENST00000531466 TGM1P22735 817 aa7.43□□□□□ -1.22
PTPRK-220ENST00000531466 DPTQ07507 201 aa7.43□□□□□ -1.22
PTPRK-220ENST00000531466 DUSP8Q13202 625 aa7.43□□□□□ -1.22
PTPRK-220ENST00000531466 TBR1Q16650 682 aa7.43□□□□□ -1.22
PTPRK-220ENST00000531466 MAMDC4Q6UXC1 1216 aa7.43□□□□□ -1.22
PTPRK-220ENST00000531466 DPP8Q6V1X1 898 aaPredicted RBP7.43□□□□□ -1.22
PTPRK-220ENST00000531466 HNRNPLLQ8WVV9 542 aaKnown RBP7.43□□□□□ -1.22
PTPRK-220ENST00000531466 ZFYVE21Q9BQ24 234 aa7.43□□□□□ -1.22
PTPRK-220ENST00000531466 KIAA1683Q9H0B3 1180 aa7.43□□□□□ -1.22
PTPRK-220ENST00000531466 ARHGAP28Q9P2N2 729 aa7.43□□□□□ -1.22
PTPRK-220ENST00000531466 TCRBV5S4A2TA0A5A2 114 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 FGFR1P11362 822 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 ADCY8P40145 1251 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 ETV4P43268 484 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 BTBD8Q5XKL5 378 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 STYK1Q6J9G0 422 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 NSMFQ6X4W1 530 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 AMER2Q8N7J2 671 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 SGSM3Q96HU1 749 aa7.42□□□□□ -1.22
PTPRK-220ENST00000531466 FAM90A27PA6NNH2 459 aa7.41□□□□□ -1.22
PTPRK-220ENST00000531466 ACRV1P26436 265 aa7.41□□□□□ -1.22
PTPRK-220ENST00000531466 KCNQ1P51787 676 aa7.41□□□□□ -1.22
PTPRK-220ENST00000531466 CACTINQ8WUQ7 758 aaKnown RBP7.41□□□□□ -1.22
PTPRK-220ENST00000531466 SCYL1Q96KG9 808 aa7.41□□□□□ -1.22
PTPRK-220ENST00000531466 ALG1Q9BT22 464 aa7.41□□□□□ -1.22
PTPRK-220ENST00000531466 RIC8BQ9NVN3 520 aa7.41□□□□□ -1.22
PTPRK-220ENST00000531466 R3HCC1Q9Y3T6 440 aaKnown RBP7.41□□□□□ -1.22
PTPRK-220ENST00000531466 ASXL2Q76L83 1435 aa7.41□□□□□ -1.22
PTPRK-220ENST00000531466 ARHGAP6O43182 974 aa7.4□□□□□ -1.22
PTPRK-220ENST00000531466 HMGCRP04035 888 aa7.4□□□□□ -1.22
PTPRK-220ENST00000531466 FGRP09769 529 aa7.4□□□□□ -1.22
PTPRK-220ENST00000531466 PTPN1P18031 435 aaKnown RBP7.4□□□□□ -1.22
PTPRK-220ENST00000531466 ERCC5P28715 1186 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-220ENST00000531466 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-220ENST00000531466 DDR2Q16832 855 aa7.4□□□□□ -1.22
PTPRK-220ENST00000531466 YOD1Q5VVQ6 348 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-220ENST00000531466 LARP4Q71RC2 724 aaKnown RBP eCLIP7.4□□□□□ -1.22
PTPRK-220ENST00000531466 ZDHHC5Q9C0B5 715 aa7.4□□□□□ -1.22
PTPRK-220ENST00000531466 MSX2P35548 267 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms