RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 CCDC60Q8IWA6 550 aaPredicted RBP21.26■□□□□ 0.99
PTPRU-211ENST00000531385 TRAPPC12Q8WVT3 735 aa21.26■□□□□ 0.99
PTPRU-211ENST00000531385 OSBPL7Q9BZF2 842 aa21.26■□□□□ 0.99
PTPRU-211ENST00000531385 AZI2Q9H6S1 392 aa21.26■□□□□ 0.99
PTPRU-211ENST00000531385 TRPC6Q9Y210 931 aa21.26■□□□□ 0.99
PTPRU-211ENST00000531385 BACH1O14867 736 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 ATG7O95352 703 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 XBP1P17861 261 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 RFC2P35250 354 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 STAT5BP51692 787 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 USP11P51784 963 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 NR5A1Q13285 461 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 PIK3AP1Q6ZUJ8 805 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 KRT25Q7Z3Z0 450 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 FAM177A1Q8N128 213 aaPredicted RBP21.25■□□□□ 0.99
PTPRU-211ENST00000531385 WASF1Q92558 559 aa21.25■□□□□ 0.99
PTPRU-211ENST00000531385 PTPRSQ13332 1948 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 WDR81Q562E7 1941 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.24■□□□□ 0.99
PTPRU-211ENST00000531385 CCDC194A0A1B0GVG4 234 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.24■□□□□ 0.99
PTPRU-211ENST00000531385 CHMP2AO43633 222 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 SLC37A4O43826 429 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 PFKMP08237 780 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 GNAT1P11488 350 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 INSRRP14616 1297 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 LETM2Q2VYF4 491 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 GPR153Q6NV75 609 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 SIP14410 1827 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 NRCAMQ92823 1304 aa21.24■□□□□ 0.99
PTPRU-211ENST00000531385 IGKV6D-21A0A0A0MT36 114 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 DNAJB2P25686 324 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 GUCY1B3Q02153 619 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 MARCH8Q5T0T0 291 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 ZNF697Q5TEC3 545 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 SWSAP1Q6NVH7 229 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 MIS18BP1Q6P0N0 1132 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 TRMT1LQ7Z2T5 733 aaKnown RBP21.23■□□□□ 0.99
PTPRU-211ENST00000531385 PBX4Q9BYU1 374 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 MTIF3Q9H2K0 278 aaKnown RBP21.23■□□□□ 0.99
PTPRU-211ENST00000531385 TTYH1Q9H313 450 aaPredicted RBP21.23■□□□□ 0.99
PTPRU-211ENST00000531385 TBC1D22BQ9NU19 505 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 MTMR10Q9NXD2 777 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 TUBE1Q9UJT0 475 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 SLC4A7Q9Y6M7 1214 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 COL6A3P12111 3177 aa21.23■□□□□ 0.99
PTPRU-211ENST00000531385 RSPH10B2B2RC85 870 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 GAS7O60861 476 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 RSPH10BP0C881 870 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 KRT2P35908 639 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 RABGGTBP53611 331 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 Q4G0T1 1027 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 ZNF746Q6NUN9 644 aaPredicted RBP21.22■□□□□ 0.99
PTPRU-211ENST00000531385 PDXDC2PQ6P474 469 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 PLPPR4Q7Z2D5 763 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 SLC5A5Q92911 643 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 UNC45AQ9H3U1 944 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 ZNF302Q9NR11 478 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 DDX25Q9UHL0 483 aaKnown RBP21.22■□□□□ 0.99
PTPRU-211ENST00000531385 TCEAL9Q9UHQ7 104 aa21.22■□□□□ 0.99
PTPRU-211ENST00000531385 MYH9P35579 1960 aaKnown RBP21.22■□□□□ 0.99
PTPRU-211ENST00000531385 CYP3A7-CYP3A51PA0A087WV96 503 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 POTEB3A0JP26 581 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 CD2BP2O95400 341 aaKnown RBP21.21■□□□□ 0.99
PTPRU-211ENST00000531385 CXCL10P02778 98 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 ACTN1P12814 892 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 MYOGP15173 224 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 ATP4AP20648 1035 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 CYP3A7P24462 503 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 KRT76Q01546 638 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 RABEP1Q15276 862 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 LRCH2Q5VUJ6 765 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 FAM160B1Q5W0V3 765 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 KRT40Q6A162 431 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 POTEBQ6S5H4 581 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 ETNPPLQ8TBG4 499 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 TNFRSF25Q93038 417 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 MBOAT7Q96N66 472 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 UPF2Q9HAU5 1272 aaKnown RBP21.21■□□□□ 0.99
PTPRU-211ENST00000531385 YBX2Q9Y2T7 364 aaKnown RBP21.21■□□□□ 0.99
PTPRU-211ENST00000531385 SAMM50Q9Y512 469 aa21.21■□□□□ 0.99
PTPRU-211ENST00000531385 MBLAC1A4D2B0 266 aaPredicted RBP21.2■□□□□ 0.98
PTPRU-211ENST00000531385 MMP1P03956 469 aa21.2■□□□□ 0.98
PTPRU-211ENST00000531385 TMCO2Q7Z6W1 182 aaPredicted RBP21.2■□□□□ 0.98
PTPRU-211ENST00000531385 NEK8Q86SG6 692 aa21.2■□□□□ 0.98
PTPRU-211ENST00000531385 DIS3L2Q8IYB7 885 aaKnown RBP21.2■□□□□ 0.98
PTPRU-211ENST00000531385 DNAJB3Q8WWF6 145 aa21.2■□□□□ 0.98
PTPRU-211ENST00000531385 TBC1D32Q96NH3 1257 aa21.2■□□□□ 0.98
PTPRU-211ENST00000531385 GUCD1Q96NT3 240 aa21.2■□□□□ 0.98
PTPRU-211ENST00000531385 TEKT3Q9BXF9 490 aa21.2■□□□□ 0.98
PTPRU-211ENST00000531385 FAM49AQ9H0Q0 323 aaPredicted RBP21.2■□□□□ 0.98
PTPRU-211ENST00000531385 GABBR1Q9UBS5 961 aa21.2■□□□□ 0.98
PTPRU-211ENST00000531385 GTF3C3Q9Y5Q9 886 aa21.2■□□□□ 0.98
PTPRU-211ENST00000531385 WDR64B1ANS9 1081 aa21.19■□□□□ 0.98
PTPRU-211ENST00000531385 BTBD18B2RXH4 712 aa21.19■□□□□ 0.98
PTPRU-211ENST00000531385 PSMD10O75832 226 aa21.19■□□□□ 0.98
PTPRU-211ENST00000531385 ATP2A2P16615 1042 aaKnown RBP21.19■□□□□ 0.98
PTPRU-211ENST00000531385 UGCGQ16739 394 aa21.19■□□□□ 0.98
PTPRU-211ENST00000531385 CNKSR3Q6P9H4 555 aa21.19■□□□□ 0.98
PTPRU-211ENST00000531385 CKAP2LQ8IYA6 745 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms