RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 BMPR1AP36894 532 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 PTH1RQ03431 593 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 SMAD2Q15796 467 aaKnown RBP10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 PKN1Q16512 942 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 UTP14CQ5TAP6 766 aaKnown RBP10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 EP400NLQ6ZTU2 488 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 ASCL5Q7RTU5 278 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 RTN4RL1Q86UN2 441 aaPredicted RBP10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 PIBF1Q8WXW3 757 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 APBB2Q92870 758 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 IL17RAQ96F46 866 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 IPO9Q96P70 1041 aaKnown RBP10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 BACH2Q9BYV9 841 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 IRF2BPLQ9H1B7 796 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 AGO3Q9H9G7 860 aaKnown RBP10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 PRKAG3Q9UGI9 489 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 FAM50BQ9Y247 325 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 ZFHX4Q86UP3 3567 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 NRCAMQ92823 1304 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 CACNA1GO43497 2377 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 MYO10Q9HD67 2058 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 GSTTP1A0A1W2PQM5 241 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 MBLAC1A4D2B0 266 aaPredicted RBP10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 ENPP3O14638 875 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 STAM2O75886 525 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 DGKIO75912 1065 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 ITGB5P18084 799 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 TCF7P36402 384 aaPredicted RBP10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 NEDD9Q14511 834 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 GNPTABQ3T906 1256 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 FBXO47Q5MNV8 452 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 BMP8AQ7Z5Y6 402 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 ADGRD2Q7Z7M1 963 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 FIBCD1Q8N539 461 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 EDAQ92838 391 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 MSLNLQ96KJ4 702 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 ALG13Q9NP73 1137 aaKnown RBP10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 TRPC6Q9Y210 931 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 PCDHGC5Q9Y5F6 944 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 MRPL42Q9Y6G3 142 aaKnown RBP10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 CACNA1BQ00975 2339 aa10.61□□□□□ -0.71
CHMP4A-205ENST00000531158 DCHS1Q96JQ0 3298 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 TMEM221A6NGB7 291 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 E7EWF7 191 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 M0R296 226 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 HIP1O00291 1037 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 PIK3CDO00329 1044 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 IFIT3O14879 490 aaKnown RBP10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 MMP1P03956 469 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 RB1P06400 928 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 HERC4Q5GLZ8 1057 aaPredicted RBP10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 RNF135Q8IUD6 432 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 MB21D2Q8IYB1 491 aaPredicted RBP10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 IGDCC4Q8TDY8 1250 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 DNAJB3Q8WWF6 145 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 PCYT2Q99447 389 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 SENP7Q9BQF6 1050 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 C11orf84Q9BUA3 381 aaPredicted RBP10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 MYL10Q9BUA6 226 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 CLEC1BQ9P126 229 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 ZNF215Q9UL58 517 aaPredicted RBP10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 PLAGL2Q9UPG8 496 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 VPS13AQ96RL7 3174 aa10.6□□□□□ -0.71
CHMP4A-205ENST00000531158 MED19A0JLT2 244 aaPredicted RBP10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 H0Y858 1186 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 PLEKHA8P1O95397 391 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 GLP2RO95838 553 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 ITGB1P05556 798 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 GNAT1P11488 350 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 MARK3P27448 753 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 CD52P31358 61 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 GATMP50440 423 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 PPFIA1Q13136 1202 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 ADAM15Q13444 863 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 SMAD4Q13485 552 aaKnown RBP10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 GRIK4Q16099 956 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 TSHZ1Q6ZSZ6 1077 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 TRIM67Q6ZTA4 783 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 CMTR1Q8N1G2 835 aaKnown RBP10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 SPZ1Q9BXG8 430 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 LMAN2LQ9H0V9 348 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 RWDD1Q9H446 243 aaPredicted RBP10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 IGFLR1Q9H665 355 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 LY9Q9HBG7 655 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 TLR9Q9NR96 1032 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 TUBE1Q9UJT0 475 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 CDY2AQ9Y6F7 541 aa10.59□□□□□ -0.71
CHMP4A-205ENST00000531158 WDR87Q6ZQQ6 2873 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 MRPS6P82932 125 aaKnown RBP10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 RBM10P98175 930 aaKnown RBP10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 TMEM62Q0P6H9 643 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 BTG3Q14201 252 aaPredicted RBP10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 WTAPQ15007 396 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 TTC22Q5TAA0 569 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 TAF2Q6P1X5 1199 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 FBXL6Q8N531 539 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
CHMP4A-205ENST00000531158 SPPL3Q8TCT6 385 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms