RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TTLL4Q14679 1199 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 PKN2Q16513 984 aaKnown RBP16.1■□□□□ 0.17
TTC39A-216ENST00000530004 ECM1Q16610 540 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 CCDC144BQ3MJ40 725 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 LRCH2Q5VUJ6 765 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 TRPV1Q8NER1 839 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 ZNF577Q9BSK1 485 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 AGO4Q9HCK5 861 aaKnown RBP16.1■□□□□ 0.17
TTC39A-216ENST00000530004 BLOC1S4Q9NUP1 217 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 MCM3APO60318 1980 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 IPO5O00410 1097 aaKnown RBP16.1■□□□□ 0.17
TTC39A-216ENST00000530004 SLC26A4O43511 780 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 RPN1P04843 607 aaKnown RBP16.1■□□□□ 0.17
TTC39A-216ENST00000530004 INHAP05111 366 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 MYL1P05976 194 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 SP2Q02086 613 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 HYIQ5T013 277 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 HAUS3Q68CZ6 603 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 IQSEC1Q6DN90 963 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 FBXO46Q6PJ61 603 aaPredicted RBP16.1■□□□□ 0.17
TTC39A-216ENST00000530004 MLKLQ8NB16 471 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 ERMNQ8TAM6 284 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 SH3TC2Q8TF17 1288 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 RAD54LQ92698 747 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 PKD2L1Q9P0L9 805 aa16.1■□□□□ 0.17
TTC39A-216ENST00000530004 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
TTC39A-216ENST00000530004 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-216ENST00000530004 POTEB3A0JP26 581 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 GAS7O60861 476 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 PSMD10O75832 226 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 TXNP10599 105 aaKnown RBP16.09■□□□□ 0.17
TTC39A-216ENST00000530004 KCNA2P16389 499 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 UBA1P22314 1058 aaKnown RBP16.09■□□□□ 0.17
TTC39A-216ENST00000530004 AMPD3Q01432 767 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-216ENST00000530004 DHX8Q14562 1220 aaKnown RBP16.09■□□□□ 0.17
TTC39A-216ENST00000530004 LY6KQ17RY6 165 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 TMEM63BQ5T3F8 832 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 POTEBQ6S5H4 581 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 SV2BQ7L1I2 683 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 LARP4BQ92615 738 aaKnown RBP16.09■□□□□ 0.17
TTC39A-216ENST00000530004 PPP1R9BQ96SB3 815 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 SENP7Q9BQF6 1050 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 NT5C3AQ9H0P0 336 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 RMND1Q9NWS8 449 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 DACH1Q9UI36 760 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 STK24Q9Y6E0 443 aa16.09■□□□□ 0.17
TTC39A-216ENST00000530004 MED24O75448 989 aa16.08■□□□□ 0.17
TTC39A-216ENST00000530004 MCM6Q14566 821 aa16.08■□□□□ 0.17
TTC39A-216ENST00000530004 SLC9C1Q4G0N8 1177 aa16.08■□□□□ 0.17
TTC39A-216ENST00000530004 KCNK18Q7Z418 384 aa16.08■□□□□ 0.17
TTC39A-216ENST00000530004 RIT2Q99578 217 aa16.08■□□□□ 0.17
TTC39A-216ENST00000530004 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.17
TTC39A-216ENST00000530004 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.17
TTC39A-216ENST00000530004 DHX15O43143 795 aaKnown RBP16.08■□□□□ 0.16
TTC39A-216ENST00000530004 AP5Z1O43299 807 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 ADCY6O43306 1168 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 CHMP2AO43633 222 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 AKR1A1P14550 325 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 SMPD1P17405 629 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 CCND3P30281 292 aaPredicted RBP16.08■□□□□ 0.16
TTC39A-216ENST00000530004 TNFAIP2Q03169 654 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 PPP2R5CQ13362 524 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 NEDD9Q14511 834 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 DUSP28Q4G0W2 176 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 C7orf25Q9BPX7 421 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 TEKT3Q9BXF9 490 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 TRIM9Q9C026 710 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 BCAS3Q9H6U6 928 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 TBC1D22BQ9NU19 505 aa16.08■□□□□ 0.16
TTC39A-216ENST00000530004 NFASCO94856 1347 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 SMTNL1A8MU46 457 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 EML1O00423 815 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 SEPT4O43236 478 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 ADCY5O95622 1261 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 RPA1P27694 616 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 CNGA1P29973 690 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 GIMAP8Q8ND71 665 aaPredicted RBP16.07■□□□□ 0.16
TTC39A-216ENST00000530004 COPS5Q92905 334 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 PDLIM2Q96JY6 352 aa16.07■□□□□ 0.16
TTC39A-216ENST00000530004 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
TTC39A-216ENST00000530004 POTEFA5A3E0 1075 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 IKBKBO14920 756 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 NKRFO15226 690 aaKnown RBP eCLIP16.06■□□□□ 0.16
TTC39A-216ENST00000530004 KLRC4O43908 158 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 GGPS1O95749 300 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 ASIC1P78348 528 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 MYL5Q02045 173 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 KCNB1Q14721 858 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 NCAPHQ15003 741 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 CELF3Q5SZQ8 465 aaKnown RBP16.06■□□□□ 0.16
TTC39A-216ENST00000530004 GJC2Q5T442 439 aaPredicted RBP16.06■□□□□ 0.16
TTC39A-216ENST00000530004 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 CYFIP1Q7L576 1253 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 EIF2AK1Q9BQI3 630 aaKnown RBP16.06■□□□□ 0.16
TTC39A-216ENST00000530004 UNC45AQ9H3U1 944 aa16.06■□□□□ 0.16
TTC39A-216ENST00000530004 HMX1Q9NP08 348 aaPredicted RBP16.06■□□□□ 0.16
TTC39A-216ENST00000530004 HTTP42858 3142 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms