RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 PLVAPQ9BX97 442 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 KRT23Q9C075 422 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 BARX2Q9UMQ3 279 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-208ENST00000529994 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 CACNA1HO95180 2353 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 LOC730098B7Z3J9 87 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 FIBPO43427 364 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 ST18O60284 1047 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 PPFIA3O75145 1194 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 EYA4O95677 639 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 GLP2RO95838 553 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 CD52P31358 61 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 PPFIA1Q13136 1202 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 SEC23AQ15436 765 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 FBXO47Q5MNV8 452 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 CYB5R4Q7L1T6 521 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 FBXL6Q8N531 539 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 EFHBQ8N7U6 833 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 KLHL23Q8NBE8 558 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 POF1BQ8WVV4 589 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 LINC01599Q8WXQ3 324 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 PPP2R3CQ969Q6 453 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 AGO3Q9H9G7 860 aaKnown RBP13.06□□□□□ -0.32
SF3B2-208ENST00000529994 USP15Q9Y4E8 981 aaPredicted RBP13.06□□□□□ -0.32
SF3B2-208ENST00000529994 CDY2AQ9Y6F7 541 aa13.06□□□□□ -0.32
SF3B2-208ENST00000529994 CYTH3O43739 400 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 TCF7P36402 384 aaPredicted RBP13.05□□□□□ -0.32
SF3B2-208ENST00000529994 NT5C2P49902 561 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 GATMP50440 423 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 VCPP55072 806 aaKnown RBP13.05□□□□□ -0.32
SF3B2-208ENST00000529994 IGBP1P78318 339 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 RBM10P98175 930 aaKnown RBP13.05□□□□□ -0.32
SF3B2-208ENST00000529994 GRIK4Q16099 956 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 TAF2Q6P1X5 1199 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 RSPH3Q86UC2 560 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 RTN4RL1Q86UN2 441 aaPredicted RBP13.05□□□□□ -0.32
SF3B2-208ENST00000529994 P2RX5Q93086 422 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
SF3B2-208ENST00000529994 RIOX1Q9H6W3 641 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 CNNM2Q9H8M5 875 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 TUBE1Q9UJT0 475 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 SPTBN4Q9H254 2564 aa13.05□□□□□ -0.32
SF3B2-208ENST00000529994 PNMA6FA0A0J9YX94 578 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 PER2O15055 1255 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 GFRA3O60609 400 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 STAM2O75886 525 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 CHMLP26374 656 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 TMEM62Q0P6H9 643 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 COASYQ13057 564 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 GRM4Q14833 912 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 USP17L6PQ6QN14 398 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 TSHZ1Q6ZSZ6 1077 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 CMTR2Q8IYT2 770 aaKnown RBP13.04□□□□□ -0.32
SF3B2-208ENST00000529994 RUFY2Q8WXA3 655 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 PRRX2Q99811 253 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 FRMPD4Q14CM0 1322 aa13.04□□□□□ -0.32
SF3B2-208ENST00000529994 PTPRZ1P23471 2315 aaPredicted RBP13.04□□□□□ -0.32
SF3B2-208ENST00000529994 ATP9AO75110 1047 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 MRPS6P82932 125 aaKnown RBP13.03□□□□□ -0.32
SF3B2-208ENST00000529994 SIGLEC14Q08ET2 396 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 TRAF1Q13077 416 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 PKN1Q16512 942 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 MARCH8Q5T0T0 291 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 SMARCC2Q8TAQ2 1214 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 MICAL1Q8TDZ2 1067 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 ATOH1Q92858 354 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-208ENST00000529994 GLG1Q92896 1179 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 PHF7Q9BWX1 381 aaPredicted RBP13.03□□□□□ -0.32
SF3B2-208ENST00000529994 TLE6Q9H808 572 aa13.03□□□□□ -0.32
SF3B2-208ENST00000529994 MYO15AQ9UKN7 3530 aa13.02□□□□□ -0.32
SF3B2-208ENST00000529994 MYO10Q9HD67 2058 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 GSTTP1A0A1W2PQM5 241 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 IFIT3O14879 490 aaKnown RBP13.02□□□□□ -0.33
SF3B2-208ENST00000529994 SP100P23497 879 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-208ENST00000529994 AVPR2P30518 371 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 PTH1RQ03431 593 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 CBX2Q14781 532 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-208ENST00000529994 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 PCNX4Q63HM2 1172 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 NLRX1Q86UT6 975 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 VN1R2Q8NFZ6 395 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 ASIC4Q96FT7 647 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 ERAP1Q9NZ08 941 aa13.02□□□□□ -0.33
SF3B2-208ENST00000529994 FNDC1Q4ZHG4 1894 aaPredicted RBP13.02□□□□□ -0.33
SF3B2-208ENST00000529994 MBLAC1A4D2B0 266 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-208ENST00000529994 H0Y858 1186 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 PDGFBP01127 241 aaPredicted RBP13.01□□□□□ -0.33
SF3B2-208ENST00000529994 STAG3L1P0CL83 205 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 SCG2P13521 617 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 KCNA2P16389 499 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 SPOUT1Q5T280 376 aaKnown RBP13.01□□□□□ -0.33
SF3B2-208ENST00000529994 CRIPAKQ8N1N5 446 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 TRAPPC12Q8WVT3 735 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms