RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 ARF3P61204 181 aaPredicted RBP13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 ARF1P84077 181 aaKnown RBP13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 RASSF5Q8WWW0 418 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 MMTAG2Q9BU76 263 aaKnown RBP13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 BRIP1Q9BX63 1249 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 SMARCA1P28370 1054 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 CASKIN1Q8WXD9 1431 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 PTPDC1A2A3K4 754 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 ANKRD65E5RJM6 399 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 EPHB1P54762 984 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 BTN3A3O00478 584 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 STRNO43815 780 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 ACSL3O95573 720 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 CENPAP49450 140 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 TFAP4Q01664 338 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 TRAP1Q12931 704 aaKnown RBP13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 SDE2Q6IQ49 451 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 DIS3LQ8TF46 1054 aaKnown RBP13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 H2AFY2Q9P0M6 372 aaPredicted RBP13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 STK24Q9Y6E0 443 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 M0QZ92 97 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 AK2P54819 239 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 CALCRLQ16602 461 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 STKLD1Q8NE28 680 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 TRIM11Q96F44 468 aa13.56□□□□□ -0.24
PDE4DIP-227ENST00000529945 DCTN2Q13561 401 aaKnown RBP13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 HERC4Q5GLZ8 1057 aaPredicted RBP13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 CDC37L1Q7L3B6 337 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 RDH13Q8NBN7 331 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 EXOSC4Q9NPD3 245 aaKnown RBP13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 TTC17Q96AE7 1141 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 ARL2BPQ9Y2Y0 163 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 KCNJ18B7U540 433 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 MEIS1O00470 390 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 CA4P22748 312 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 TNFAIP2Q03169 654 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 KCNJ12Q14500 433 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 ATXN3P54252 364 aaPredicted RBP13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 PRAMEP78395 509 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 LDHAL6AQ6ZMR3 332 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 HACE1Q8IYU2 909 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 GCFC2P16383 781 aaKnown RBP13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 CDC27P30260 824 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 UBE2Q1Q7Z7E8 422 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 LRRC8AQ8IWT6 810 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 CCDC51Q96ER9 411 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 MTRQ99707 1265 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 MYH6P13533 1939 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 NINQ8N4C6 2090 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 SRGAP2CP0DJJ0 459 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 EIF2B5Q13144 721 aaKnown RBP13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 EIF2S3LQ2VIR3 472 aaKnown RBP13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 F8W8V4 182 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 EFR3AQ14156 821 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 CCNYQ8ND76 341 aa13.55□□□□□ -0.24
PDE4DIP-227ENST00000529945 DHX38Q92620 1227 aaKnown RBP13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 MAPKAPK2P49137 400 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 ADCY2Q08462 1091 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 LBRQ14739 615 aaKnown RBP13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 RBBP7Q16576 425 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 SERPINB13Q9UIV8 391 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 MID2Q9UJV3 735 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 MAGEB6P1A0A0J9YX57 407 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 GYS1P13807 737 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 TAF1BQ53T94 588 aaPredicted RBP13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 ULK3Q6PHR2 472 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 XPO4Q9C0E2 1151 aaKnown RBP13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 CYP2J2P51589 502 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 PPIDQ08752 370 aaKnown RBP13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 BBS5Q8N3I7 341 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 KCTD6Q8NC69 237 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 VIPAS39Q9H9C1 493 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 MAP3K2Q9Y2U5 619 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 PEX1O43933 1283 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 CBFBQ13951 182 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 CENPPQ6IPU0 288 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 ANAPC7Q9UJX3 599 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 TMOD1P28289 359 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 RASSF7Q02833 373 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 LGALS3BPQ08380 585 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 OR8K1Q8NGG5 319 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 SCG3Q8WXD2 468 aaKnown RBP13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 C1orf112Q9NSG2 853 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 PI4K2BG5E9Z4 385 aa13.54□□□□□ -0.24
PDE4DIP-227ENST00000529945 CXCR5P32302 372 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms