RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FCHSD1Q86WN1 690 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 ENAHQ8N8S7 591 aaPredicted RBP10.41□□□□□ -0.74
VPS11-203ENST00000529545 KRT23Q9C075 422 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 KAT6AQ92794 2004 aa10.41□□□□□ -0.74
VPS11-203ENST00000529545 NRCAMQ92823 1304 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 ZNF318Q5VUA4 2279 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 TMEM221A6NGB7 291 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 M0R296 226 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 OPLAHO14841 1288 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 MMP1P03956 469 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 GHRP10912 638 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 ADAM15Q13444 863 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 UTP14CQ5TAP6 766 aaKnown RBP10.4□□□□□ -0.74
VPS11-203ENST00000529545 TAF2Q6P1X5 1199 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 TRIM67Q6ZTA4 783 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 CYFIP1Q7L576 1253 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 HOMER1Q86YM7 354 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 IL31RAQ8NI17 732 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 CLP1Q92989 425 aaKnown RBP10.4□□□□□ -0.74
VPS11-203ENST00000529545 OSBPL7Q9BZF2 842 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 IRF2BPLQ9H1B7 796 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 CNNM2Q9H8M5 875 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 ALG13Q9NP73 1137 aaKnown RBP10.4□□□□□ -0.74
VPS11-203ENST00000529545 ZSWIM5Q9P217 1185 aa10.4□□□□□ -0.74
VPS11-203ENST00000529545 MYO7AQ13402 2215 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 SPATA31C2B4DYI2 1134 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 RBAK-RBAKDNI3L0D1 243 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 ENPP3O14638 875 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 FIBPO43427 364 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 TBX10O75333 385 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 ICAM3P32942 547 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 NAALADL2Q58DX5 795 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 PRSS33Q8NF86 280 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 LMBR1Q8WVP7 490 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 GPKOWQ92917 476 aaPredicted RBP eCLIP10.39□□□□□ -0.75
VPS11-203ENST00000529545 P2RX5Q93086 422 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 GPR20Q99678 358 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 PLAGL2Q9UPG8 496 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 LAMA4Q16363 1823 aa10.39□□□□□ -0.75
VPS11-203ENST00000529545 LINC01565O15544 149 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 PPP1R11O60927 126 aaPredicted RBP10.38□□□□□ -0.75
VPS11-203ENST00000529545 EYA4O95677 639 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 CHRNA1P02708 482 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 RPLP2P05387 115 aaKnown RBP10.38□□□□□ -0.75
VPS11-203ENST00000529545 SDSP20132 328 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 GTF2F1P35269 517 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS11-203ENST00000529545 LSM11P83369 360 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS11-203ENST00000529545 ZXDAP98168 799 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 SP4Q02446 784 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
VPS11-203ENST00000529545 CWC27Q6UX04 472 aaKnown RBP10.38□□□□□ -0.75
VPS11-203ENST00000529545 TRIM50Q86XT4 487 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 FBXL6Q8N531 539 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 GIMAP8Q8ND71 665 aaPredicted RBP10.38□□□□□ -0.75
VPS11-203ENST00000529545 MTMR8Q96EF0 704 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 INPP4AQ96PE3 977 aaPredicted RBP10.38□□□□□ -0.75
VPS11-203ENST00000529545 EHMT1Q9H9B1 1298 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 RTEL1Q9NZ71 1219 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 ATG2AQ2TAZ0 1938 aa10.38□□□□□ -0.75
VPS11-203ENST00000529545 PNMA6FA0A0J9YX94 578 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 PALM3A6NDB9 673 aaPredicted RBP10.37□□□□□ -0.75
VPS11-203ENST00000529545 HIP1O00291 1037 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 DGKIO75912 1065 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 LINC00271P0C7V0 271 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 STAG3L1P0CL83 205 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 RRP1P56182 461 aaKnown RBP10.37□□□□□ -0.75
VPS11-203ENST00000529545 ADAM17P78536 824 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 MRPS9P82933 396 aaKnown RBP10.37□□□□□ -0.75
VPS11-203ENST00000529545 COASYQ13057 564 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 TRDNQ13061 729 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 PPFIA1Q13136 1202 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 LPIN1Q14693 890 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 TSHZ1Q6ZSZ6 1077 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 NLRX1Q86UT6 975 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 CMTR2Q8IYT2 770 aaKnown RBP10.37□□□□□ -0.75
VPS11-203ENST00000529545 MICAL1Q8TDZ2 1067 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 CUL5Q93034 780 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 ZNF689Q96CS4 500 aaPredicted RBP10.37□□□□□ -0.75
VPS11-203ENST00000529545 MSLNLQ96KJ4 702 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 PIGSQ96S52 555 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 PHOX2BQ99453 314 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 SENP7Q9BQF6 1050 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 DSCC1Q9BVC3 393 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 FTHL17Q9BXU8 183 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 BCAS3Q9H6U6 928 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 DOCK5Q9H7D0 1870 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 RC3H2Q9HBD1 1191 aaKnown RBP10.37□□□□□ -0.75
VPS11-203ENST00000529545 MAD2L2Q9UI95 211 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 TUBE1Q9UJT0 475 aa10.37□□□□□ -0.75
VPS11-203ENST00000529545 TECTAO75443 2155 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 ERICH2A1L162 156 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 FSD2A1L4K1 749 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 LOC730098B7Z3J9 87 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 M0QZ92 97 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 GFRA3O60609 400 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 NRIP1P48552 1158 aa10.36□□□□□ -0.75
VPS11-203ENST00000529545 SIGLEC14Q08ET2 396 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms