RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 NPAS4Q8IUM7 802 aa15.53■□□□□ 0.08
HIF3A-212ENST00000529205 EFHBQ8N7U6 833 aa15.53■□□□□ 0.08
HIF3A-212ENST00000529205 PIBF1Q8WXW3 757 aa15.53■□□□□ 0.08
HIF3A-212ENST00000529205 GPRASP2Q96D09 838 aa15.53■□□□□ 0.08
HIF3A-212ENST00000529205 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
HIF3A-212ENST00000529205 IRF2BPLQ9H1B7 796 aa15.53■□□□□ 0.08
HIF3A-212ENST00000529205 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
HIF3A-212ENST00000529205 LRFN2Q9ULH4 789 aa15.53■□□□□ 0.08
HIF3A-212ENST00000529205 SUPT16HQ9Y5B9 1047 aaKnown RBP15.53■□□□□ 0.08
HIF3A-212ENST00000529205 FSD2A1L4K1 749 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 TMEM221A6NGB7 291 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 M0R296 226 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 MARK3P27448 753 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 MRPS6P82932 125 aaKnown RBP15.52■□□□□ 0.08
HIF3A-212ENST00000529205 COASYQ13057 564 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 FAM43BQ6ZT52 329 aaPredicted RBP15.52■□□□□ 0.08
HIF3A-212ENST00000529205 SMC5Q8IY18 1101 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 NCOA7Q8NI08 942 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 CTCFLQ8NI51 663 aaPredicted RBP15.52■□□□□ 0.08
HIF3A-212ENST00000529205 MICAL1Q8TDZ2 1067 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 POF1BQ8WVV4 589 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 MSLNLQ96KJ4 702 aa15.52■□□□□ 0.08
HIF3A-212ENST00000529205 MRPL42Q9Y6G3 142 aaKnown RBP15.52■□□□□ 0.08
HIF3A-212ENST00000529205 BRWD1Q9NSI6 2320 aa15.52■□□□□ 0.07
HIF3A-212ENST00000529205 MUC6Q6W4X9 2439 aa15.52■□□□□ 0.07
HIF3A-212ENST00000529205 MBLAC1A4D2B0 266 aaPredicted RBP15.51■□□□□ 0.07
HIF3A-212ENST00000529205 PIK3CDO00329 1044 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 MAFGO15525 162 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 ST18O60284 1047 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 ITGB1P05556 798 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 CD52P31358 61 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 KIF5BP33176 963 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 NRIP1P48552 1158 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 IGBP1P78318 339 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 ZXDAP98168 799 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 TROAPQ12815 778 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 USP17L6PQ6QN14 398 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 RBM23Q86U06 439 aaKnown RBP15.51■□□□□ 0.07
HIF3A-212ENST00000529205 KLHL23Q8NBE8 558 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 SMRP1Q8NCR6 262 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 SPPL3Q8TCT6 385 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 AZI2Q9H6S1 392 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 AAASQ9NRG9 546 aa15.51■□□□□ 0.07
HIF3A-212ENST00000529205 LOC730098B7Z3J9 87 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 SRGAP2BP0DMP2 458 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 NUCB1Q02818 461 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 PAK2Q13177 524 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 MTMR1Q13613 665 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 CAMK1Q14012 370 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 SLC35G1Q2M3R5 365 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 PAN2Q504Q3 1202 aaKnown RBP15.5■□□□□ 0.07
HIF3A-212ENST00000529205 SPOUT1Q5T280 376 aaKnown RBP15.5■□□□□ 0.07
HIF3A-212ENST00000529205 FBXL6Q8N531 539 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 RUFY2Q8WXA3 655 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 MAP3K14Q99558 947 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 LZTS2Q9BRK4 669 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 PHF7Q9BWX1 381 aaPredicted RBP15.5■□□□□ 0.07
HIF3A-212ENST00000529205 FAM49AQ9H0Q0 323 aaPredicted RBP15.5■□□□□ 0.07
HIF3A-212ENST00000529205 TLE6Q9H808 572 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 TELO2Q9Y4R8 837 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 PCDHB12Q9Y5F1 795 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 TRPV2Q9Y5S1 764 aa15.5■□□□□ 0.07
HIF3A-212ENST00000529205 GSTTP1A0A1W2PQM5 241 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 MEIS2O14770 477 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 SCG2P13521 617 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 KCNA2P16389 499 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 SMARCA1P28370 1054 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 UBE3AQ05086 875 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 SIGLEC14Q08ET2 396 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 ODR4Q5SWX8 454 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 PRSS33Q8NF86 280 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 RPGRIP1Q96KN7 1286 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 SNX27Q96L92 541 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 SPZ1Q9BXG8 430 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 PSTPIP2Q9H939 334 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 AGO3Q9H9G7 860 aaKnown RBP15.49■□□□□ 0.07
HIF3A-212ENST00000529205 CLEC1BQ9P126 229 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 PADI3Q9ULW8 664 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 PCDHB7Q9Y5E2 793 aa15.49■□□□□ 0.07
HIF3A-212ENST00000529205 SPDYE3A6NKU9 549 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 ATP9AO75110 1047 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 PPFIA3O75145 1194 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 INSRRP14616 1297 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 DNAJB1P25685 340 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 GNAQP50148 359 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 CBX2Q14781 532 aaPredicted RBP15.48■□□□□ 0.07
HIF3A-212ENST00000529205 MARCH8Q5T0T0 291 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 PDE12Q6L8Q7 609 aaKnown RBP15.48■□□□□ 0.07
HIF3A-212ENST00000529205 ADGRD2Q7Z7M1 963 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 NME8Q8N427 588 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 CDCA3Q99618 268 aaPredicted RBP15.48■□□□□ 0.07
HIF3A-212ENST00000529205 CELF4Q9BZC1 486 aaKnown RBP15.48■□□□□ 0.07
HIF3A-212ENST00000529205 PKD2L1Q9P0L9 805 aa15.48■□□□□ 0.07
HIF3A-212ENST00000529205 BARX2Q9UMQ3 279 aaPredicted RBP15.48■□□□□ 0.07
HIF3A-212ENST00000529205 USP15Q9Y4E8 981 aaPredicted RBP15.48■□□□□ 0.07
HIF3A-212ENST00000529205 CYP21A2P08686 494 aa15.47■□□□□ 0.07
HIF3A-212ENST00000529205 ATF7P17544 494 aaPredicted RBP15.47■□□□□ 0.07
HIF3A-212ENST00000529205 IER5LQ5T953 404 aa15.47■□□□□ 0.07
HIF3A-212ENST00000529205 RTN4RL1Q86UN2 441 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms