RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 KCTD1Q719H9 257 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 SLFN11Q7Z7L1 901 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 ACTRT1Q8TDG2 376 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 GJA10Q969M2 543 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 LENG9Q96B70 501 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 ZDHHC15Q96MV8 337 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 P2RX7Q99572 595 aaKnown RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 POLR3CQ9BUI4 534 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 IDI2Q9BXS1 227 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 METTL14Q9HCE5 456 aaKnown RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 GOLGA6AQ9NYA3 693 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 SMARCAL1Q9NZC9 954 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 HDAC9Q9UKV0 1011 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 INTUQ9ULD6 942 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 PCDHA1Q9Y5I3 950 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 MYH10P35580 1976 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 A0A0A6YYK5 440 aaPredicted RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L15C9J2P7 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L13C9JLJ4 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L11C9JVI0 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L18D6R9N7 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L22D6RA61 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L17D6RBQ6 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L19D6RCP7 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L20D6RJB6 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 RIMBP2O15034 1052 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 HSF2BPO75031 334 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 EYA4O95677 639 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 AFPP02771 609 aaKnown RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 SSBP05455 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 GLI1P08151 1106 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 EEF2P13639 858 aaKnown RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 HMGB2P26583 209 aaKnown RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 PON1P27169 355 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 CXCR5P32302 372 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 SREBF1P36956 1147 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 HSPA9P38646 679 aaKnown RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 MAGEA9P43362 315 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 NPEPPSP55786 919 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 JAM2P57087 298 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 ARHGAP4P98171 946 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 SLC7A5Q01650 507 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L24Q0WX57 530 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 PAK2Q13177 524 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 RAPGEF1Q13905 1077 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 SLC15A2Q16348 729 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 IFI16Q16666 785 aaKnown RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 KIAA0753Q2KHM9 967 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 DNAJC21Q5F1R6 531 aaKnown RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 USP17L6PQ6QN14 398 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 ZNF571Q7Z3V5 609 aaPredicted RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 NELFCDQ8IXH7 590 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 LRRC57Q8N9N7 239 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 GMCL1P1Q8NEA9 526 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 WHAMMQ8TF30 809 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 TEKT1Q969V4 418 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 ARL8AQ96BM9 186 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 BORCS6Q96GS4 357 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 GMCL1Q96IK5 515 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 MS4A14Q96JA4 679 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 GDAP1L1Q96MZ0 367 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 AMNQ9BXJ7 453 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 ZC3H12CQ9C0D7 883 aaKnown RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 RASSF4Q9H2L5 321 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 DNAJC18Q9H819 358 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 SIX2Q9NPC8 291 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 TYW1Q9NV66 732 aaKnown RBP9.19□□□□□ -0.94
CSTF3-208ENST00000528865 EHD2Q9NZN4 543 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 TBC1D7Q9P0N9 293 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 SYNPO2Q9UMS6 1093 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 DNM3Q9UQ16 869 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 STXBP5LQ9Y2K9 1186 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 MYH7BA7E2Y1 1941 aa9.19□□□□□ -0.94
CSTF3-208ENST00000528865 SRRM3A6NNA2 597 aaPredicted RBP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 TRIM66O15016 1216 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 EIF3HO15372 352 aaKnown RBP eCLIP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 KIF4AO95239 1232 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 CPP00450 1065 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 UCHL3P15374 230 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 NPR1P16066 1061 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 GAP43P17677 238 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 SLC9A1P19634 815 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 NR2F2P24468 414 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 RPL13P26373 211 aaKnown RBP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 STAT3P40763 770 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 MATR3P43243 847 aaKnown RBP eCLIP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 CARSP49589 748 aaKnown RBP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 NAP1L1P55209 391 aaKnown RBP9.18□□□□□ -0.94
CSTF3-208ENST00000528865 PSMC6P62333 389 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 PTK2Q05397 1052 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 NFIAQ12857 509 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 RPS6KA1Q15418 735 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 TTMPQ5BVD1 217 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 FAM182BQ5T319 152 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 UBR3Q6ZT12 1888 aa9.18□□□□□ -0.94
CSTF3-208ENST00000528865 ZFPM1Q8IX07 1006 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms