RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 TRIM29Q14134 588 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 GPNMBQ14956 572 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 PPP4R3AQ6IN85 833 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 PSRC1Q6PGN9 363 aaPredicted RBP19.06■□□□□ 0.64
HIF3A-211ENST00000528563 LRCH3Q96II8 777 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 TMX3Q96JJ7 454 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 BRMS1Q9HCU9 246 aa19.06■□□□□ 0.64
HIF3A-211ENST00000528563 FAM205CA6NFA0 338 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 PSMD10O75832 226 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 SLC26A2P50443 739 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 PLCB4Q15147 1175 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 LETM2Q2VYF4 491 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 MARCH8Q5T0T0 291 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 SWSAP1Q6NVH7 229 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 MIS18BP1Q6P0N0 1132 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 TRAF7Q6Q0C0 670 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 CCDC60Q8IWA6 550 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-211ENST00000528563 SMAP1Q8IYB5 467 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-211ENST00000528563 DIS3L2Q8IYB7 885 aaKnown RBP19.05■□□□□ 0.64
HIF3A-211ENST00000528563 ETNPPLQ8TBG4 499 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 HERVK_113Q902F9 699 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 GJA10Q969M2 543 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 RNPC3Q96LT9 517 aaKnown RBP19.05■□□□□ 0.64
HIF3A-211ENST00000528563 DDX25Q9UHL0 483 aaKnown RBP19.05■□□□□ 0.64
HIF3A-211ENST00000528563 PCDHA10Q9Y5I2 948 aa19.05■□□□□ 0.64
HIF3A-211ENST00000528563 KAT6AQ92794 2004 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 MBLAC1A4D2B0 266 aaPredicted RBP19.04■□□□□ 0.64
HIF3A-211ENST00000528563 SLC37A4O43826 429 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 GAS7O60861 476 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 PFKMP08237 780 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 INSRRP14616 1297 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 GCFC2P16383 781 aaKnown RBP19.04■□□□□ 0.64
HIF3A-211ENST00000528563 MCM2P49736 904 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 FOSBP53539 338 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 PPFIA1Q13136 1202 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 ZNF618Q5T7W0 954 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 LRCH2Q5VUJ6 765 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 LRRC8DQ7L1W4 858 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 FBXO18Q8NFZ0 1043 aa19.04■□□□□ 0.64
HIF3A-211ENST00000528563 MAFBQ9Y5Q3 323 aaPredicted RBP19.04■□□□□ 0.64
HIF3A-211ENST00000528563 RRN3P2A6NIE6 340 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 BACH1O14867 736 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 PARNO95453 639 aaKnown RBP19.03■□□□□ 0.64
HIF3A-211ENST00000528563 ATP4AP20648 1035 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 GRIK4Q16099 956 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 FAM160B1Q5W0V3 765 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 GPR153Q6NV75 609 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 B3GNT9Q6UX72 402 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 DEFB128Q7Z7B8 93 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 TNPO1Q92973 898 aaKnown RBP19.03■□□□□ 0.64
HIF3A-211ENST00000528563 C8orf76Q96K31 380 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 ZNF302Q9NR11 478 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 SCN5AQ14524 2016 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 POTEB3A0JP26 581 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 PSAPP07602 524 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 THPOP40225 353 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 GUCY1B3Q02153 619 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 PDXDC2PQ6P474 469 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 POTEBQ6S5H4 581 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 OTOP2Q7RTS6 562 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 FAM20AQ96MK3 541 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 NAP1L4Q99733 375 aaKnown RBP19.03■□□□□ 0.64
HIF3A-211ENST00000528563 TEKT3Q9BXF9 490 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 UNC45AQ9H3U1 944 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 KCNMB3Q9NPA1 279 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 DISC1Q9NRI5 854 aa19.03■□□□□ 0.64
HIF3A-211ENST00000528563 CXXC1Q9P0U4 656 aaPredicted RBP19.03■□□□□ 0.64
HIF3A-211ENST00000528563 TET1Q8NFU7 2136 aa19.02■□□□□ 0.64
HIF3A-211ENST00000528563 WDR64B1ANS9 1081 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 CCNT1O60563 726 aaKnown RBP19.02■□□□□ 0.63
HIF3A-211ENST00000528563 NBNO60934 754 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 CAND2O75155 1236 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 MBTPS1Q14703 1052 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 RPAINQ86UA6 219 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 FAM184AQ8NB25 1140 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 ATP8B4Q8TF62 1192 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 TCEAL9Q9UHQ7 104 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 TRPC6Q9Y210 931 aa19.02■□□□□ 0.63
HIF3A-211ENST00000528563 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.01■□□□□ 0.63
HIF3A-211ENST00000528563 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.01■□□□□ 0.63
HIF3A-211ENST00000528563 RSPH10B2B2RC85 870 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 TBX3O15119 743 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 HBP1O60381 514 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 CXCL10P02778 98 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 RSPH10BP0C881 870 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 SFNP31947 248 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 SMAD3P84022 425 aaKnown RBP19.01■□□□□ 0.63
HIF3A-211ENST00000528563 SAFBQ15424 915 aaKnown RBP eCLIP19.01■□□□□ 0.63
HIF3A-211ENST00000528563 TAF2Q6P1X5 1199 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 RUFY4Q6ZNE9 571 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 HAS1Q92839 578 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 TUBE1Q9UJT0 475 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 SAMM50Q9Y512 469 aa19.01■□□□□ 0.63
HIF3A-211ENST00000528563 LAMA2P24043 3122 aaKnown RBP19.01■□□□□ 0.63
HIF3A-211ENST00000528563 JAK3P52333 1124 aa19■□□□□ 0.63
HIF3A-211ENST00000528563 IGBP1P78318 339 aa19■□□□□ 0.63
HIF3A-211ENST00000528563 FAM26DQ5JW98 314 aa19■□□□□ 0.63
HIF3A-211ENST00000528563 RDM1Q8NG50 284 aa19■□□□□ 0.63
HIF3A-211ENST00000528563 FTOQ9C0B1 505 aaKnown RBP eCLIP19■□□□□ 0.63
HIF3A-211ENST00000528563 FOXP1Q9H334 677 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms