RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 FAM217BQ9NTX9 383 aaPredicted RBP29.56■■■□□ 2.32
TRIM3-206ENST00000528227 NFASCO94856 1347 aa29.55■■■□□ 2.32
TRIM3-206ENST00000528227 KLF18A0A0U1RQI7 1052 aa29.55■■■□□ 2.32
TRIM3-206ENST00000528227 GOLGA8AA7E2F4 631 aa29.55■■■□□ 2.32
TRIM3-206ENST00000528227 GOLGA8BA8MQT2 603 aa29.55■■■□□ 2.32
TRIM3-206ENST00000528227 FOSP01100 380 aaPredicted RBP29.55■■■□□ 2.32
TRIM3-206ENST00000528227 LPIN1Q14693 890 aa29.55■■■□□ 2.32
TRIM3-206ENST00000528227 DNAJB3Q8WWF6 145 aa29.55■■■□□ 2.32
TRIM3-206ENST00000528227 BARHL2Q9NY43 387 aa29.55■■■□□ 2.32
TRIM3-206ENST00000528227 ARP10275 920 aa29.54■■■□□ 2.32
TRIM3-206ENST00000528227 INSRRP14616 1297 aa29.54■■■□□ 2.32
TRIM3-206ENST00000528227 RCAN1P53805 252 aa29.54■■■□□ 2.32
TRIM3-206ENST00000528227 IGBP1P78318 339 aa29.54■■■□□ 2.32
TRIM3-206ENST00000528227 CEP55Q53EZ4 464 aa29.54■■■□□ 2.32
TRIM3-206ENST00000528227 SDF4Q9BRK5 362 aa29.54■■■□□ 2.32
TRIM3-206ENST00000528227 NLRC5Q86WI3 1866 aa29.54■■■□□ 2.32
TRIM3-206ENST00000528227 SMCO2A6NFE2 343 aa29.53■■■□□ 2.32
TRIM3-206ENST00000528227 RRN3P2A6NIE6 340 aa29.53■■■□□ 2.32
TRIM3-206ENST00000528227 CDC27P30260 824 aa29.53■■■□□ 2.32
TRIM3-206ENST00000528227 ACTR2P61160 394 aa29.53■■■□□ 2.32
TRIM3-206ENST00000528227 FBXO47Q5MNV8 452 aa29.53■■■□□ 2.32
TRIM3-206ENST00000528227 MRPL38Q96DV4 380 aaKnown RBP29.53■■■□□ 2.32
TRIM3-206ENST00000528227 AZI2Q9H6S1 392 aa29.53■■■□□ 2.32
TRIM3-206ENST00000528227 UBE2ZQ9H832 354 aaPredicted RBP29.53■■■□□ 2.32
TRIM3-206ENST00000528227 CDY2AQ9Y6F7 541 aa29.53■■■□□ 2.32
TRIM3-206ENST00000528227 RALGAPA2Q2PPJ7 1873 aa29.53■■■□□ 2.32
TRIM3-206ENST00000528227 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.52■■■□□ 2.32
TRIM3-206ENST00000528227 H3BNC9 293 aa29.52■■■□□ 2.32
TRIM3-206ENST00000528227 HMGB1P09429 215 aaKnown RBP29.52■■■□□ 2.32
TRIM3-206ENST00000528227 SREBF1P36956 1147 aa29.52■■■□□ 2.32
TRIM3-206ENST00000528227 CLK2P49760 499 aaKnown RBP29.52■■■□□ 2.32
TRIM3-206ENST00000528227 ITGB3BPQ13352 177 aaPredicted RBP29.52■■■□□ 2.32
TRIM3-206ENST00000528227 AP3B2Q13367 1082 aa29.52■■■□□ 2.32
TRIM3-206ENST00000528227 TMEM192Q8IY95 271 aa29.52■■■□□ 2.32
TRIM3-206ENST00000528227 ZBTB10Q96DT7 871 aa29.52■■■□□ 2.32
TRIM3-206ENST00000528227 AGO4Q9HCK5 861 aaKnown RBP29.52■■■□□ 2.32
TRIM3-206ENST00000528227 TMEM260Q9NX78 707 aa29.52■■■□□ 2.32
TRIM3-206ENST00000528227 NCOR1O75376 2440 aa29.51■■■□□ 2.31
TRIM3-206ENST00000528227 MEIS1O00470 390 aa29.51■■■□□ 2.31
TRIM3-206ENST00000528227 RPLP2P05387 115 aaKnown RBP29.51■■■□□ 2.31
TRIM3-206ENST00000528227 MRPS6P82932 125 aaKnown RBP29.51■■■□□ 2.31
TRIM3-206ENST00000528227 GPM6BQ13491 265 aa29.51■■■□□ 2.31
TRIM3-206ENST00000528227 PTPROQ16827 1216 aa29.51■■■□□ 2.31
TRIM3-206ENST00000528227 PLPPR4Q7Z2D5 763 aa29.51■■■□□ 2.31
TRIM3-206ENST00000528227 IL17RAQ96F46 866 aa29.51■■■□□ 2.31
TRIM3-206ENST00000528227 GLT8D2Q9H1C3 349 aa29.51■■■□□ 2.31
TRIM3-206ENST00000528227 TRPC6Q9Y210 931 aa29.51■■■□□ 2.31
TRIM3-206ENST00000528227 COL9A1P20849 921 aa29.5■■■□□ 2.31
TRIM3-206ENST00000528227 PLCB4Q15147 1175 aa29.5■■■□□ 2.31
TRIM3-206ENST00000528227 TSHZ1Q6ZSZ6 1077 aa29.5■■■□□ 2.31
TRIM3-206ENST00000528227 TNPO1Q92973 898 aaKnown RBP29.5■■■□□ 2.31
TRIM3-206ENST00000528227 FAM49AQ9H0Q0 323 aaPredicted RBP29.5■■■□□ 2.31
TRIM3-206ENST00000528227 BDP1A6H8Y1 2624 aa29.49■■■□□ 2.31
TRIM3-206ENST00000528227 ENPP3O14638 875 aa29.49■■■□□ 2.31
TRIM3-206ENST00000528227 ATG7O95352 703 aa29.49■■■□□ 2.31
TRIM3-206ENST00000528227 STAT5BP51692 787 aa29.49■■■□□ 2.31
TRIM3-206ENST00000528227 FIBCD1Q8N539 461 aa29.49■■■□□ 2.31
TRIM3-206ENST00000528227 ADD1P35611 737 aaKnown RBP29.48■■■□□ 2.31
TRIM3-206ENST00000528227 TIGD5Q53EQ6 642 aa29.48■■■□□ 2.31
TRIM3-206ENST00000528227 TRAPPC12Q8WVT3 735 aa29.48■■■□□ 2.31
TRIM3-206ENST00000528227 KCNB2Q92953 911 aa29.48■■■□□ 2.31
TRIM3-206ENST00000528227 AGO3Q9H9G7 860 aaKnown RBP29.48■■■□□ 2.31
TRIM3-206ENST00000528227 RC3H2Q9HBD1 1191 aaKnown RBP29.48■■■□□ 2.31
TRIM3-206ENST00000528227 NAP1L2Q9ULW6 460 aaPredicted RBP29.48■■■□□ 2.31
TRIM3-206ENST00000528227 PCDHA2Q9Y5H9 948 aa29.48■■■□□ 2.31
TRIM3-206ENST00000528227 LINC00271P0C7V0 271 aa29.47■■■□□ 2.31
TRIM3-206ENST00000528227 CPA1P15085 419 aa29.47■■■□□ 2.31
TRIM3-206ENST00000528227 METAP2P50579 478 aaKnown RBP eCLIP29.47■■■□□ 2.31
TRIM3-206ENST00000528227 FGD1P98174 961 aa29.47■■■□□ 2.31
TRIM3-206ENST00000528227 PFKFB3Q16875 520 aaPredicted RBP29.47■■■□□ 2.31
TRIM3-206ENST00000528227 IER5Q5VY09 327 aa29.47■■■□□ 2.31
TRIM3-206ENST00000528227 NIPA1Q7RTP0 329 aa29.47■■■□□ 2.31
TRIM3-206ENST00000528227 SQORQ9Y6N5 450 aa29.47■■■□□ 2.31
TRIM3-206ENST00000528227 ADGRA3Q8IWK6 1321 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 CCNE2O96020 404 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 CD52P31358 61 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 ZNF76P36508 570 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 APOBRQ0VD83 1088 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 LEXMQ3ZCV2 418 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 JAKMIP3Q5VZ66 844 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 LINC01599Q8WXQ3 324 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 TRPV2Q9Y5S1 764 aa29.46■■■□□ 2.31
TRIM3-206ENST00000528227 IGKV6D-21A0A0A0MT36 114 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 CCDC196A0A1B0GTZ2 297 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 POTEB3A0JP26 581 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 FAM86B1E9PN63 330 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 C5orf67F2Z3F1 127 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 FAM86B2P0C5J1 330 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 SCG2P13521 617 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 KCNA5P22460 613 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 SLC26A2P50443 739 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 POTEBQ6S5H4 581 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 Q6ZUG5 572 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 BANK1Q8NDB2 785 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 CRYGNQ8WXF5 182 aa29.45■■■□□ 2.31
TRIM3-206ENST00000528227 ZNF689Q96CS4 500 aaPredicted RBP29.45■■■□□ 2.31
TRIM3-206ENST00000528227 BRWD1Q9NSI6 2320 aa29.45■■■□□ 2.3
TRIM3-206ENST00000528227 TTC3P53804 2025 aa29.44■■■□□ 2.3
TRIM3-206ENST00000528227 NID2Q14112 1375 aa29.44■■■□□ 2.3
TRIM3-206ENST00000528227 M0QZ92 97 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms