RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TLR3O15455 904 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 ATP9AO75110 1047 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 ARHGEF15O94989 841 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 CD4P01730 458 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 ZNF286BP0CG31 522 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 ITGB5P18084 799 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 CST5P28325 142 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 CCL23P55773 120 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 SP4Q02446 784 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 NOSTRINQ8IVI9 506 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 CRYGNQ8WXF5 182 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 ARNTL2Q8WYA1 636 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 VTI1AQ96AJ9 217 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 VWCEQ96DN2 955 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 KCNH6Q9H252 994 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 HIPK3Q9H422 1215 aa13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 DAXXQ9UER7 740 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-210ENST00000528149 TDP2O95551 362 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 MMP3P08254 477 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 ATP2B1P20020 1258 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 ZNF76P36508 570 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 NKX3-2P78367 333 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 RESTQ13127 1097 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 HIC1Q14526 733 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 LETM2Q2VYF4 491 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 AP5M1Q9H0R1 490 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
CCDC90B-210ENST00000528149 FAM86B1E9PN63 330 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 GGPS1O95749 300 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 CYP3A4P08684 503 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 FAM86B2P0C5J1 330 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 ALADP13716 330 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 SSTR3P32745 418 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 PURAQ00577 322 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 GRB10Q13322 594 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 NBR1Q14596 966 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 HSDL1Q3SXM5 330 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 XRRA1Q6P2D8 792 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 SPRED2Q7Z698 418 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 FAM178BQ8IXR5 827 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 KAT2BQ92831 832 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 GJA10Q969M2 543 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 INPP4AQ96PE3 977 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
CCDC90B-210ENST00000528149 TRIOO75962 3097 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 IGLV3-22A0A075B6J6 115 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 SLC37A4O43826 429 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 LPXNO60711 386 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 EIF3JO75822 258 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 STAM2O75886 525 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 ARP10275 920 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 TAP1Q03518 808 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 TTLL4Q14679 1199 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 CEP55Q53EZ4 464 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 PRR16Q569H4 304 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 PLA2G4DQ86XP0 818 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 PCSK9Q8NBP7 692 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 MXRA8Q9BRK3 442 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 NOC4LQ9BVI4 516 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 TRPV6Q9H1D0 765 aa13.08□□□□□ -0.32
CCDC90B-210ENST00000528149 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 SPATA31C2B4DYI2 1134 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 FIBPO43427 364 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 B4GALT4O60513 344 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 CCNT1O60563 726 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 GH1P01241 217 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 ZSCAN22P10073 491 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 KCNA2P16389 499 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 CIITAP33076 1130 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 DDIT3P35638 169 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 TOB1P50616 345 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 USP11P51784 963 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 ZNF200P98182 395 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 MTMR1Q13613 665 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 GNPTABQ3T906 1256 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 MYSM1Q5VVJ2 828 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 FAM173BQ6P4H8 233 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 CYFIP1Q7L576 1253 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 BRAPQ7Z569 592 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 NLRX1Q86UT6 975 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 LENG9Q96B70 501 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 GPRASP2Q96D09 838 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 ZBTB10Q96DT7 871 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 SCLYQ96I15 445 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 CTAGE1Q96RT6 745 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 JADE2Q9NQC1 790 aa13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 TRMT13Q9NUP7 481 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 DDX25Q9UHL0 483 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 NOL7Q9UMY1 257 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-210ENST00000528149 ZFHX2Q9C0A1 2572 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms