RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZNF577Q9BSK1 485 aa37.53■■■■□ 3.6
SSSCA1-205ENST00000527920 RRN3P2A6NIE6 340 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 SEC24BO95487 1268 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 STAT5BP51692 787 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 WDR5P61964 334 aaKnown RBP37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 GRIN2CQ14957 1233 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 FAM26DQ5JW98 314 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 ABHD15Q6UXT9 468 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 LENG9Q96B70 501 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 SLC28A3Q9HAS3 691 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 TUBE1Q9UJT0 475 aa37.52■■■■□ 3.6
SSSCA1-205ENST00000527920 M0R2N6 131 aa37.51■■■■□ 3.6
SSSCA1-205ENST00000527920 RPLP2P05387 115 aaKnown RBP37.51■■■■□ 3.6
SSSCA1-205ENST00000527920 KCNJ6P48051 423 aa37.51■■■■□ 3.6
SSSCA1-205ENST00000527920 RABGGTBP53611 331 aa37.51■■■■□ 3.6
SSSCA1-205ENST00000527920 NPY5RQ15761 445 aa37.51■■■■□ 3.6
SSSCA1-205ENST00000527920 PRR16Q569H4 304 aa37.51■■■■□ 3.6
SSSCA1-205ENST00000527920 BLIDQ8IZY5 108 aa37.51■■■■□ 3.6
SSSCA1-205ENST00000527920 NKX2-4Q9H2Z4 354 aa37.51■■■■□ 3.6
SSSCA1-205ENST00000527920 IKBKEQ14164 716 aa37.5■■■■□ 3.59
SSSCA1-205ENST00000527920 MARCH8Q5T0T0 291 aa37.5■■■■□ 3.59
SSSCA1-205ENST00000527920 ZNF746Q6NUN9 644 aaPredicted RBP37.5■■■■□ 3.59
SSSCA1-205ENST00000527920 HERC6Q8IVU3 1022 aa37.5■■■■□ 3.59
SSSCA1-205ENST00000527920 MYLIPQ8WY64 445 aa37.5■■■■□ 3.59
SSSCA1-205ENST00000527920 EDIL3O43854 480 aa37.49■■■■□ 3.59
SSSCA1-205ENST00000527920 PLCB4Q15147 1175 aa37.49■■■■□ 3.59
SSSCA1-205ENST00000527920 PLEKHG4Q58EX7 1191 aa37.49■■■■□ 3.59
SSSCA1-205ENST00000527920 FAM160B1Q5W0V3 765 aa37.49■■■■□ 3.59
SSSCA1-205ENST00000527920 AIFM3Q96NN9 605 aa37.49■■■■□ 3.59
SSSCA1-205ENST00000527920 INSRRP14616 1297 aa37.48■■■■□ 3.59
SSSCA1-205ENST00000527920 XBP1P17861 261 aa37.48■■■■□ 3.59
SSSCA1-205ENST00000527920 KRT76Q01546 638 aa37.48■■■■□ 3.59
SSSCA1-205ENST00000527920 MIS18BP1Q6P0N0 1132 aa37.48■■■■□ 3.59
SSSCA1-205ENST00000527920 RSPH3Q86UC2 560 aa37.48■■■■□ 3.59
SSSCA1-205ENST00000527920 SMAP1Q8IYB5 467 aaPredicted RBP37.48■■■■□ 3.59
SSSCA1-205ENST00000527920 TBCKQ8TEA7 893 aa37.48■■■■□ 3.59
SSSCA1-205ENST00000527920 TRPC6Q9Y210 931 aa37.48■■■■□ 3.59
SSSCA1-205ENST00000527920 CHD9Q3L8U1 2897 aa37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 DDX39AO00148 427 aaKnown RBP37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 CTSHP09668 335 aa37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 NEK4P51957 841 aa37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 TCTN1Q2MV58 587 aa37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 RUFY4Q6ZNE9 571 aa37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 PHF20Q9BVI0 1012 aa37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 TCEAL9Q9UHQ7 104 aa37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 KAT6AQ92794 2004 aa37.47■■■■□ 3.59
SSSCA1-205ENST00000527920 KIF28PB7ZC32 967 aa37.46■■■■□ 3.59
SSSCA1-205ENST00000527920 CTDNEP1O95476 244 aa37.46■■■■□ 3.59
SSSCA1-205ENST00000527920 FOSL2P15408 326 aa37.46■■■■□ 3.59
SSSCA1-205ENST00000527920 MKRN4PQ13434 485 aaPredicted RBP37.46■■■■□ 3.59
SSSCA1-205ENST00000527920 DBF4BQ8NFT6 615 aa37.46■■■■□ 3.59
SSSCA1-205ENST00000527920 CYP3A7-CYP3A51PA0A087WV96 503 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 POTEB3A0JP26 581 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 BACH1O14867 736 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 CYP3A7P24462 503 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 PPP2R2DQ66LE6 453 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 POTEBQ6S5H4 581 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 MOXD1Q6UVY6 613 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 CCDC60Q8IWA6 550 aaPredicted RBP37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 WASF1Q92558 559 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 GTF3C6Q969F1 213 aa37.45■■■■□ 3.59
SSSCA1-205ENST00000527920 GBF1Q92538 1859 aa37.44■■■■□ 3.58
SSSCA1-205ENST00000527920 MYOGP15173 224 aa37.44■■■■□ 3.58
SSSCA1-205ENST00000527920 ME3Q16798 604 aa37.44■■■■□ 3.58
SSSCA1-205ENST00000527920 KRT25Q7Z3Z0 450 aa37.44■■■■□ 3.58
SSSCA1-205ENST00000527920 ATP8B4Q8TF62 1192 aa37.44■■■■□ 3.58
SSSCA1-205ENST00000527920 SEPT8Q92599 483 aa37.44■■■■□ 3.58
SSSCA1-205ENST00000527920 RIT2Q99578 217 aa37.44■■■■□ 3.58
SSSCA1-205ENST00000527920 ZNF302Q9NR11 478 aa37.44■■■■□ 3.58
SSSCA1-205ENST00000527920 Q4G0T1 1027 aa37.43■■■■□ 3.58
SSSCA1-205ENST00000527920 ORC3Q9UBD5 711 aaPredicted RBP37.43■■■■□ 3.58
SSSCA1-205ENST00000527920 PCDHA10Q9Y5I2 948 aa37.43■■■■□ 3.58
SSSCA1-205ENST00000527920 MSH4O15457 936 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 HBP1O60381 514 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 CHRNA1P02708 482 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 DEFB103AP81534 67 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 NONOQ15233 471 aaKnown RBP eCLIP37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 C8orf34Q49A92 452 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 MAFAQ8NHW3 353 aaPredicted RBP37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 APBB2Q92870 758 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 MBOAT7Q96N66 472 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 KCNJ14Q9UNX9 436 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 PCDHA2Q9Y5H9 948 aa37.42■■■■□ 3.58
SSSCA1-205ENST00000527920 CA3P07451 260 aa37.41■■■■□ 3.58
SSSCA1-205ENST00000527920 IGBP1P78318 339 aa37.41■■■■□ 3.58
SSSCA1-205ENST00000527920 MGAT3Q09327 533 aa37.41■■■■□ 3.58
SSSCA1-205ENST00000527920 PDXDC2PQ6P474 469 aa37.41■■■■□ 3.58
SSSCA1-205ENST00000527920 SLC5A5Q92911 643 aa37.41■■■■□ 3.58
SSSCA1-205ENST00000527920 MAFBQ9Y5Q3 323 aaPredicted RBP37.41■■■■□ 3.58
SSSCA1-205ENST00000527920 COL1A2P08123 1366 aa37.41■■■■□ 3.58
SSSCA1-205ENST00000527920 LARGE1O95461 756 aa37.4■■■■□ 3.58
SSSCA1-205ENST00000527920 PSAPP07602 524 aa37.4■■■■□ 3.58
SSSCA1-205ENST00000527920 SWSAP1Q6NVH7 229 aa37.4■■■■□ 3.58
SSSCA1-205ENST00000527920 NECAB1Q8N987 351 aa37.4■■■■□ 3.58
SSSCA1-205ENST00000527920 DNAJB3Q8WWF6 145 aa37.4■■■■□ 3.58
SSSCA1-205ENST00000527920 GAS2L1Q99501 681 aaPredicted RBP37.4■■■■□ 3.58
SSSCA1-205ENST00000527920 PRDM12Q9H4Q4 367 aa37.4■■■■□ 3.58
SSSCA1-205ENST00000527920 WDR64B1ANS9 1081 aa37.39■■■■□ 3.58
SSSCA1-205ENST00000527920 TLL1O43897 1013 aa37.39■■■■□ 3.58
SSSCA1-205ENST00000527920 GJB5O95377 273 aa37.39■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms