RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 LRP10Q7Z4F1 713 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 ENAHQ8N8S7 591 aaPredicted RBP13.59□□□□□ -0.23
TSKU-203ENST00000527881 BAP1Q92560 729 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 CENPTQ96BT3 561 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 TSG101Q99816 390 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 A6NHS1 94 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 COPB2P35606 906 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 PMS2P54278 862 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 METTL13Q8N6R0 699 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 CDK5RAP3Q96JB5 506 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 RAB3IPQ96QF0 476 aaPredicted RBP13.59□□□□□ -0.23
TSKU-203ENST00000527881 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 ZSCAN10Q96SZ4 725 aaPredicted RBP13.59□□□□□ -0.23
TSKU-203ENST00000527881 TRIM9Q9C026 710 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 SEMA6BQ9H3T3 888 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 DBR1Q9UK59 544 aaKnown RBP13.59□□□□□ -0.23
TSKU-203ENST00000527881 TRAF5O00463 557 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 SNX3O60493 162 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 KLC1Q07866 573 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 USP4Q13107 963 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 SLC18A3Q16572 532 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 INTS8Q75QN2 995 aaKnown RBP13.58□□□□□ -0.23
TSKU-203ENST00000527881 ARHGAP22Q7Z5H3 698 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 LBHD1Q9BQE6 289 aaPredicted RBP13.58□□□□□ -0.23
TSKU-203ENST00000527881 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 SNX24Q9Y343 169 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 ATP6V0A2Q9Y487 856 aa13.58□□□□□ -0.23
TSKU-203ENST00000527881 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 CCDC188H7C350 402 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 SMIM22K7EJ46 135 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 VEGFAP15692 232 aaPredicted RBP13.58□□□□□ -0.24
TSKU-203ENST00000527881 RFC5P40937 340 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 SLC29A2Q14542 456 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 PPP2R5BQ15173 497 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 ZC3H12AQ5D1E8 599 aaKnown RBP13.58□□□□□ -0.24
TSKU-203ENST00000527881 KSR1Q8IVT5 923 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 DRAXINQ8NBI3 349 aaPredicted RBP13.58□□□□□ -0.24
TSKU-203ENST00000527881 ATXN2LQ8WWM7 1075 aaKnown RBP13.58□□□□□ -0.24
TSKU-203ENST00000527881 TLCD1Q96CP7 247 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 EPAS1Q99814 870 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 A0A1B0GVG6 124 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 FGGP02679 453 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 ADCY1Q08828 1119 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 TAOK1Q7L7X3 1001 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 BLIDQ8IZY5 108 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 NUDCD1Q96RS6 583 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 KBTBD4Q9NVX7 518 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 KLHL14Q9P2G3 628 aa13.58□□□□□ -0.24
TSKU-203ENST00000527881 CYP2D7A0A087X1C5 515 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 ADAMTS3O15072 1205 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 UQCRFS1P1P0C7P4 283 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 ALDH3A1P30838 453 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 TUBP50607 506 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 USP11P51784 963 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 RNASELQ05823 741 aaKnown RBP13.57□□□□□ -0.24
TSKU-203ENST00000527881 RNF220Q5VTB9 566 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 ANO7Q6IWH7 933 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 SYNE4Q8N205 404 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 EPS8L3Q8TE67 593 aaKnown RBP13.57□□□□□ -0.24
TSKU-203ENST00000527881 STMN4Q9H169 189 aaPredicted RBP13.57□□□□□ -0.24
TSKU-203ENST00000527881 ZMYND8Q9ULU4 1186 aaPredicted RBP13.57□□□□□ -0.24
TSKU-203ENST00000527881 MYH7BA7E2Y1 1941 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 SNAP23O00161 211 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 MYL1P05976 194 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 SLC5A9Q2M3M2 681 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 HGSNATQ68CP4 663 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 EIF1ADQ8N9N8 165 aaKnown RBP13.57□□□□□ -0.24
TSKU-203ENST00000527881 SPATA5Q8NB90 893 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 DAAM1Q9Y4D1 1078 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 ADAMTS13Q76LX8 1427 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 MYBP10242 640 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 CALML3P27482 149 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 PPP1R2P41236 205 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 GCLCP48506 637 aaPredicted RBP13.57□□□□□ -0.24
TSKU-203ENST00000527881 SPATA21Q7Z572 469 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 TRIM74Q86UV6 250 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 TRIM73Q86UV7 250 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 GALNT15Q8N3T1 639 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 TNFRSF25Q93038 417 aa13.57□□□□□ -0.24
TSKU-203ENST00000527881 NKX1-2Q9UD57 310 aaPredicted RBP13.57□□□□□ -0.24
TSKU-203ENST00000527881 RASGRF2O14827 1237 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 ALADP13716 330 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 MMP13P45452 471 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 TMTC3Q6ZXV5 915 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 SRBD1Q8N5C6 995 aaKnown RBP13.56□□□□□ -0.24
TSKU-203ENST00000527881 FGD4Q96M96 766 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 SLITRK6Q9H5Y7 841 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 CEP72Q9P209 647 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 SPATA31A3Q5VYP0 1347 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 PHKG2P15735 406 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 FGFR4P22455 802 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 IGHMBP2P38935 993 aaKnown RBP13.56□□□□□ -0.24
TSKU-203ENST00000527881 DR1Q01658 176 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 ASTE1Q2TB18 679 aaPredicted RBP13.56□□□□□ -0.24
TSKU-203ENST00000527881 TBC1D25Q3MII6 688 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 TTLL11Q8NHH1 800 aa13.56□□□□□ -0.24
TSKU-203ENST00000527881 GLG1Q92896 1179 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms