RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 DOCK5Q9H7D0 1870 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 MBLAC1A4D2B0 266 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-207ENST00000527189 ATG7O95352 703 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 ARP10275 920 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 IFNAR1P17181 557 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 PDIA3P30101 505 aaKnown RBP15.27■□□□□ 0.04
CAPN1-207ENST00000527189 SLC26A2P50443 739 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 PPFIA1Q13136 1202 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 NTRK3Q16288 839 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 PKN1Q16512 942 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 BICD2Q8TD16 824 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 CRYGNQ8WXF5 182 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 TM6SF1Q9BZW5 370 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 AGO4Q9HCK5 861 aaKnown RBP15.27■□□□□ 0.04
CAPN1-207ENST00000527189 PKD2L1Q9P0L9 805 aa15.27■□□□□ 0.04
CAPN1-207ENST00000527189 KAT6AQ92794 2004 aa15.27■□□□□ 0.03
CAPN1-207ENST00000527189 STAT5BP51692 787 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 ACTR2P61160 394 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 GRIK4Q16099 956 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 ARNTL2Q8WYA1 636 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 PGBD1Q96JS3 809 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 PCYT2Q99447 389 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 SH3GLB2Q9NR46 395 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 TMEM260Q9NX78 707 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 LMCD1Q9NZU5 365 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 TUBE1Q9UJT0 475 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 MTCH2Q9Y6C9 303 aa15.26■□□□□ 0.03
CAPN1-207ENST00000527189 IGKV6D-21A0A0A0MT36 114 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 CHRNA1P02708 482 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 CTSHP09668 335 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 INSRRP14616 1297 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 MARK3P27448 753 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 ERVK-21P61565 698 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 HTRA4P83105 476 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-207ENST00000527189 ITGB3BPQ13352 177 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-207ENST00000527189 MARCH8Q5T0T0 291 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 JAKMIP3Q5VZ66 844 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.25■□□□□ 0.03
CAPN1-207ENST00000527189 FAM43BQ6ZT52 329 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-207ENST00000527189 REXO1Q8N1G1 1221 aaKnown RBP15.25■□□□□ 0.03
CAPN1-207ENST00000527189 CCDC148Q8NFR7 591 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 TOP1MTQ969P6 601 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 ZNF274Q96GC6 653 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-207ENST00000527189 TGS1Q96RS0 853 aaKnown RBP15.25■□□□□ 0.03
CAPN1-207ENST00000527189 CERS4Q9HA82 394 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 TBC1D22BQ9NU19 505 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 THEGQ9P2T0 379 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 SQORQ9Y6N5 450 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 TRANK1O15050 2925 aa15.25■□□□□ 0.03
CAPN1-207ENST00000527189 IGLV3-22A0A075B6J6 115 aa15.24■□□□□ 0.03
CAPN1-207ENST00000527189 LCHNA4D1U4 455 aa15.24■□□□□ 0.03
CAPN1-207ENST00000527189 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
CAPN1-207ENST00000527189 ARHGEF15O94989 841 aa15.24■□□□□ 0.03
CAPN1-207ENST00000527189 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
CAPN1-207ENST00000527189 SETQ01105 290 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-207ENST00000527189 CCDC85BQ15834 202 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-207ENST00000527189 TMCO2Q7Z6W1 182 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-207ENST00000527189 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
CAPN1-207ENST00000527189 MYOCDQ8IZQ8 938 aa15.24■□□□□ 0.03
CAPN1-207ENST00000527189 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-207ENST00000527189 PHKBQ93100 1093 aa15.24■□□□□ 0.03
CAPN1-207ENST00000527189 IFIH1Q9BYX4 1025 aaKnown RBP15.24■□□□□ 0.03
CAPN1-207ENST00000527189 POTEB3A0JP26 581 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 LINC01553A4QN01 128 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 EPOPA6NHQ4 379 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 RFXAPO00287 272 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 IPO5O00410 1097 aaKnown RBP15.23■□□□□ 0.03
CAPN1-207ENST00000527189 DHX15O43143 795 aaKnown RBP15.23■□□□□ 0.03
CAPN1-207ENST00000527189 CIITAP33076 1130 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 MRPS5P82675 430 aaKnown RBP15.23■□□□□ 0.03
CAPN1-207ENST00000527189 MGAT3Q09327 533 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 TOB2Q14106 344 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-207ENST00000527189 PLCB4Q15147 1175 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 IER5Q5VY09 327 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 FAM160B1Q5W0V3 765 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 POTEBQ6S5H4 581 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 ABHD15Q6UXT9 468 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 RUFY4Q6ZNE9 571 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 TRIM22Q8IYM9 498 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 NME8Q8N427 588 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-207ENST00000527189 ADAMTS19Q8TE59 1207 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 DNAJB3Q8WWF6 145 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 ASB2Q96Q27 587 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 TRPC6Q9Y210 931 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 PCDHA2Q9Y5H9 948 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 PTPRSQ13332 1948 aa15.23■□□□□ 0.03
CAPN1-207ENST00000527189 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-207ENST00000527189 HBP1O60381 514 aa15.22■□□□□ 0.03
CAPN1-207ENST00000527189 USP11P51784 963 aa15.22■□□□□ 0.03
CAPN1-207ENST00000527189 CCT2P78371 535 aaKnown RBP15.22■□□□□ 0.03
CAPN1-207ENST00000527189 GRB10Q13322 594 aa15.22■□□□□ 0.03
CAPN1-207ENST00000527189 AAK1Q2M2I8 961 aa15.22■□□□□ 0.03
CAPN1-207ENST00000527189 ZNF746Q6NUN9 644 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-207ENST00000527189 MIS18BP1Q6P0N0 1132 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms