RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 EPHA7Q15375 998 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 NBPF20Q3BBV1 942 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 UTP14CQ5TAP6 766 aaKnown RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 ARL6IP4Q66PJ3 421 aaKnown RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 USP49Q70CQ1 688 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 CLIC6Q96NY7 704 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 MTG1Q9BT17 334 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 SENP6Q9GZR1 1112 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 TUT1Q9H6E5 874 aaKnown RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 SPC25Q9HBM1 224 aa12.14□□□□□ -0.47
NEDD8-205ENST00000527046 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 TRIP12Q14669 1992 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-205ENST00000527046 MYH9P35579 1960 aaKnown RBP12.13□□□□□ -0.47
NEDD8-205ENST00000527046 A0A087WWV3 80 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 WDR64B1ANS9 1081 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 ZBTB42B2RXF5 422 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 MED24O75448 989 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-205ENST00000527046 SFNP31947 248 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 PSEN2P49810 448 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 STAT5BP51692 787 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 ITGA7Q13683 1181 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 PLCB4Q15147 1175 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 LRRC26Q2I0M4 334 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 MARCH8Q5T0T0 291 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 C1orf53Q5VUE5 145 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 MIER3Q7Z3K6 550 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 RDM1Q8NG50 284 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 EIF2AK1Q9BQI3 630 aaKnown RBP12.13□□□□□ -0.47
NEDD8-205ENST00000527046 C11orf49Q9H6J7 331 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 GABBR1Q9UBS5 961 aa12.13□□□□□ -0.47
NEDD8-205ENST00000527046 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
NEDD8-205ENST00000527046 IGSF9BQ9UPX0 1349 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 TMEM150BA6NC51 233 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 KBTBD13C9JR72 458 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 ARVCFO00192 962 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 NOP56O00567 594 aaKnown RBP12.12□□□□□ -0.47
NEDD8-205ENST00000527046 CABYRO75952 493 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 CD4P01730 458 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 JAK3P52333 1124 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-205ENST00000527046 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
NEDD8-205ENST00000527046 MFSD10Q14728 455 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 TARBP2Q15633 366 aaKnown RBP12.12□□□□□ -0.47
NEDD8-205ENST00000527046 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 NCAPH2Q6IBW4 605 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 MIS18BP1Q6P0N0 1132 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 NECAB2Q7Z6G3 386 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 SESTD1Q86VW0 696 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
NEDD8-205ENST00000527046 BANK1Q8NDB2 785 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 SMARCAD1Q9H4L7 1026 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 ZNF302Q9NR11 478 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 CHMP5Q9NZZ3 219 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 HDAC6Q9UBN7 1215 aa12.12□□□□□ -0.47
NEDD8-205ENST00000527046 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 ZEB2O60315 1214 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 PPP6R2O75170 966 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 LYPLA2O95372 231 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 YEATS4O95619 227 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 PSAPP07602 524 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 GRB10Q13322 594 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 GDF6Q6KF10 455 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-205ENST00000527046 DTHD1Q6ZMT9 781 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 ANO5Q75V66 913 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 FAM126BQ8IXS8 530 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 WNT8BQ93098 351 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 ZBTB10Q96DT7 871 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 EPSTI1Q96J88 318 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 GLT1D1Q96MS3 346 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-205ENST00000527046 POLR3CQ9BUI4 534 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-205ENST00000527046 NIFKQ9BYG3 293 aaKnown RBP12.11□□□□□ -0.47
NEDD8-205ENST00000527046 CSRNP2Q9H175 543 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 PCDHA7Q9UN72 937 aa12.11□□□□□ -0.47
NEDD8-205ENST00000527046 SPTLC2O15270 562 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 MARCH6O60337 910 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 BMP15O95972 392 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
NEDD8-205ENST00000527046 SMIM10L2AP0DMW4 78 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 SMIM10L2BP0DMW5 78 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 INSRRP14616 1297 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 MARK3P27448 753 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 RPA1P27694 616 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 QARSP47897 775 aaKnown RBP12.1□□□□□ -0.47
NEDD8-205ENST00000527046 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-205ENST00000527046 PSMC5P62195 406 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 CYP4A11Q02928 519 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 TLE2Q04725 743 aa12.1□□□□□ -0.47
NEDD8-205ENST00000527046 BRDTQ58F21 947 aaPredicted RBP12.1□□□□□ -0.47
NEDD8-205ENST00000527046 HYIQ5T013 277 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms