RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 GPKOWQ92917 476 aaPredicted RBP eCLIP12.5□□□□□ -0.41
CTSB-212ENST00000526645 ZKSCAN3Q9BRR0 538 aa12.5□□□□□ -0.41
CTSB-212ENST00000526645 AAASQ9NRG9 546 aa12.5□□□□□ -0.41
CTSB-212ENST00000526645 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
CTSB-212ENST00000526645 TUBE1Q9UJT0 475 aa12.5□□□□□ -0.41
CTSB-212ENST00000526645 PCDHB12Q9Y5F1 795 aa12.5□□□□□ -0.41
CTSB-212ENST00000526645 PCDHA1Q9Y5I3 950 aa12.5□□□□□ -0.41
CTSB-212ENST00000526645 NEDD4P46934 1319 aa12.5□□□□□ -0.41
CTSB-212ENST00000526645 FRMPD4Q14CM0 1322 aa12.5□□□□□ -0.41
CTSB-212ENST00000526645 SALL3Q9BXA9 1300 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 A0A0D9SFI3 127 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 SPATA31C2B4DYI2 1134 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 PDGFBP01127 241 aaPredicted RBP12.49□□□□□ -0.41
CTSB-212ENST00000526645 HOXB8P17481 243 aaPredicted RBP12.49□□□□□ -0.41
CTSB-212ENST00000526645 HOXA13P31271 388 aaPredicted RBP12.49□□□□□ -0.41
CTSB-212ENST00000526645 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
CTSB-212ENST00000526645 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 DUSP6Q16828 381 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 RASGRP4Q8TDF6 673 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 MICAL1Q8TDZ2 1067 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 LINC01599Q8WXQ3 324 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 MTMR8Q96EF0 704 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
CTSB-212ENST00000526645 SENP7Q9BQF6 1050 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 VAT1LQ9HCJ6 419 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 CDY2AQ9Y6F7 541 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 MYO15AQ9UKN7 3530 aa12.49□□□□□ -0.41
CTSB-212ENST00000526645 MBLAC1A4D2B0 266 aaPredicted RBP12.48□□□□□ -0.41
CTSB-212ENST00000526645 M0QZ92 97 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 ZNF213O14771 459 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 SCG2P13521 617 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 MRPS6P82932 125 aaKnown RBP12.48□□□□□ -0.41
CTSB-212ENST00000526645 PAN2Q504Q3 1202 aaKnown RBP12.48□□□□□ -0.41
CTSB-212ENST00000526645 UTP14CQ5TAP6 766 aaKnown RBP12.48□□□□□ -0.41
CTSB-212ENST00000526645 IER5Q5VY09 327 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 RUFY4Q6ZNE9 571 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 ENAHQ8N8S7 591 aaPredicted RBP12.48□□□□□ -0.41
CTSB-212ENST00000526645 TMEM105Q8N8V8 129 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 KREMEN2Q8NCW0 462 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 OTUD7AQ8TE49 926 aaPredicted RBP12.48□□□□□ -0.41
CTSB-212ENST00000526645 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 ERAP1Q9NZ08 941 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 LRFN2Q9ULH4 789 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 KAT6AQ92794 2004 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 FAM186AA6NE01 2351 aa12.48□□□□□ -0.41
CTSB-212ENST00000526645 PTPRZ1P23471 2315 aaPredicted RBP12.48□□□□□ -0.41
CTSB-212ENST00000526645 PPP1R11O60927 126 aaPredicted RBP12.47□□□□□ -0.41
CTSB-212ENST00000526645 CD52P31358 61 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 MRPS9P82933 396 aaKnown RBP12.47□□□□□ -0.41
CTSB-212ENST00000526645 KCNC3Q14003 757 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 GRIK4Q16099 956 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
CTSB-212ENST00000526645 ANKRD54Q6NXT1 300 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 XRRA1Q6P2D8 792 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 ZNF589Q86UQ0 364 aaPredicted RBP12.47□□□□□ -0.41
CTSB-212ENST00000526645 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 ADSSL1Q8N142 457 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 VN1R2Q8NFZ6 395 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 DNAJB3Q8WWF6 145 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 NECTIN4Q96NY8 510 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 S1PR5Q9H228 398 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 BCAS3Q9H6U6 928 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 AGO3Q9H9G7 860 aaKnown RBP12.47□□□□□ -0.41
CTSB-212ENST00000526645 LZTS1Q9Y250 596 aa12.47□□□□□ -0.41
CTSB-212ENST00000526645 SUPT16HQ9Y5B9 1047 aaKnown RBP12.47□□□□□ -0.41
CTSB-212ENST00000526645 DOCK5Q9H7D0 1870 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 IGSF9BQ9UPX0 1349 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 RRN3P2A6NIE6 340 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 KLRF2D3W0D1 207 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 PER2O15055 1255 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 FGF18O76093 207 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 TCF7P36402 384 aaPredicted RBP12.46□□□□□ -0.41
CTSB-212ENST00000526645 TECP42680 631 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 CLCN5P51795 746 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 PAK2Q13177 524 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 SEMA3FQ13275 785 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 FRMD5Q7Z6J6 570 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 TNPO1Q92973 898 aaKnown RBP12.46□□□□□ -0.41
CTSB-212ENST00000526645 CDHR1Q96JP9 859 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 MFSD1Q9H3U5 465 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 ZBTB47Q9UFB7 747 aaPredicted RBP12.46□□□□□ -0.41
CTSB-212ENST00000526645 PCDHGC5Q9Y5F6 944 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 TRPV2Q9Y5S1 764 aa12.46□□□□□ -0.41
CTSB-212ENST00000526645 RIF1Q5UIP0 2472 aaKnown RBP12.45□□□□□ -0.42
CTSB-212ENST00000526645 FSCN2O14926 492 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 PPFIA3O75145 1194 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 BRD1O95696 1058 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 SARSP49591 514 aaKnown RBP12.45□□□□□ -0.42
CTSB-212ENST00000526645 SP4Q02446 784 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 ITIH3Q06033 890 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 TPRNQ4KMQ1 711 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 SPOUT1Q5T280 376 aaKnown RBP12.45□□□□□ -0.42
CTSB-212ENST00000526645 IFIT1BQ5T764 474 aaKnown RBP12.45□□□□□ -0.42
CTSB-212ENST00000526645 RTN4RL1Q86UN2 441 aaPredicted RBP12.45□□□□□ -0.42
CTSB-212ENST00000526645 NLRX1Q86UT6 975 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 THNSL1Q8IYQ7 743 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 STAG2Q8N3U4 1231 aa12.45□□□□□ -0.42
CTSB-212ENST00000526645 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
CTSB-212ENST00000526645 NGRNQ9NPE2 291 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms