RNA–Protein interactions for RNA: ENST00000526286.1

NANOG-202, Transcript of Nanog homeobox, humanhuman

TSL 1 (best) BASIC

Gene NANOG, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-202ENST00000526286 SCFD1Q8WVM8 642 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 ZNF592Q92610 1267 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 PDCD2LQ9BRP1 358 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 RUSC1Q9BVN2 902 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 EDEM3Q9BZQ6 932 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 TTYH3Q9C0H2 523 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 NDST4Q9H3R1 872 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 AGO4Q9HCK5 861 aaKnown RBP11.33□□□□□ -0.6
NANOG-202ENST00000526286 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 KCNH7Q9NS40 1196 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 RGL1Q9NZL6 768 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 FAM184BQ9ULE4 1060 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 TRAF3IP3Q9Y228 551 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 ZHX2Q9Y6X8 837 aa11.33□□□□□ -0.6
NANOG-202ENST00000526286 TTC26A0AVF1 554 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 SOWAHDA6NJG2 315 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 TRAF5O00463 557 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 PDXKO00764 312 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 CETN3O15182 167 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 LYPLA2O95372 231 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 P4HBP07237 508 aaKnown RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 TRIM21P19474 475 aaKnown RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 CCND2P30279 289 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 JAK3P52333 1124 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 MAP3K9P80192 1104 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 DGKZQ13574 1117 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 MTMR1Q13613 665 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 SNRNP48Q6IEG0 339 aaKnown RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 RAD9BQ6WBX8 426 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 TOGARAM2Q6ZUX3 1019 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 NLRX1Q86UT6 975 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 GLIS3Q8NEA6 775 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 ZNF397Q8NF99 534 aaPredicted RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 IL31RAQ8NI17 732 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 DCPSQ96C86 337 aaKnown RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 GPRASP2Q96D09 838 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 PCMTD1Q96MG8 357 aaPredicted RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 TAAR1Q96RJ0 339 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 LXNQ9BS40 222 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 TEX13BQ9BXU2 312 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 FHDC1Q9C0D6 1143 aaPredicted RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 ZHX3Q9H4I2 956 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 ACAD9Q9H845 621 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 TYW1Q9NV66 732 aaKnown RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 ZNHIT6Q9NWK9 470 aaKnown RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 RNF181Q9P0P0 153 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
NANOG-202ENST00000526286 AFG3L2Q9Y4W6 797 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
NANOG-202ENST00000526286 ARHGEF35A5YM69 484 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 SLC16A3O15427 465 aaKnown RBP11.31□□□□□ -0.6
NANOG-202ENST00000526286 MAFGO15525 162 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
NANOG-202ENST00000526286 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
NANOG-202ENST00000526286 STAM2O75886 525 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
NANOG-202ENST00000526286 RPL13P26373 211 aaKnown RBP11.31□□□□□ -0.6
NANOG-202ENST00000526286 SFNP31947 248 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 ZNF131P52739 623 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 MRPS9P82933 396 aaKnown RBP11.31□□□□□ -0.6
NANOG-202ENST00000526286 CDK17Q00537 523 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 KRT76Q01546 638 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 MEA1Q16626 185 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 NFIL3Q16649 462 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 KNOP1Q1ED39 458 aaKnown RBP11.31□□□□□ -0.6
NANOG-202ENST00000526286 ARHGEF16Q5VV41 709 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 NSMFQ6X4W1 530 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 SYT10Q6XYQ8 523 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 C1orf186Q6ZWK4 172 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 NELFCDQ8IXH7 590 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 TIPINQ9BVW5 301 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 FGFBP2Q9BYJ0 223 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 ZSWIM4Q9H7M6 989 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 PARVGQ9HBI0 331 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 TBC1D7Q9P0N9 293 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
NANOG-202ENST00000526286 SIK3Q9Y2K2 1263 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 CSADQ9Y600 493 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 SNCAIPQ9Y6H5 919 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 PTPRFP10586 1907 aa11.31□□□□□ -0.6
NANOG-202ENST00000526286 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
NANOG-202ENST00000526286 DHX15O43143 795 aaKnown RBP11.3□□□□□ -0.6
NANOG-202ENST00000526286 PPP1R12BO60237 982 aaPredicted RBP11.3□□□□□ -0.6
NANOG-202ENST00000526286 CYLC1P35663 651 aaPredicted RBP11.3□□□□□ -0.6
NANOG-202ENST00000526286 IREB2P48200 963 aaKnown RBP11.3□□□□□ -0.6
NANOG-202ENST00000526286 ERVK-24P63145 666 aa11.3□□□□□ -0.6
NANOG-202ENST00000526286 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
NANOG-202ENST00000526286 ITGB3BPQ13352 177 aaPredicted RBP11.3□□□□□ -0.6
NANOG-202ENST00000526286 ALCAMQ13740 583 aa11.3□□□□□ -0.6
NANOG-202ENST00000526286 PRAMEF18Q5VWM3 479 aa11.3□□□□□ -0.6
NANOG-202ENST00000526286 TRIM65Q6PJ69 517 aa11.3□□□□□ -0.6
NANOG-202ENST00000526286 FRMD5Q7Z6J6 570 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms