RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 IWS1Q96ST2 819 aa19.57■□□□□ 0.72
CCS-204ENST00000526066 CYP3A4P08684 503 aa19.56■□□□□ 0.72
CCS-204ENST00000526066 USP11P51784 963 aa19.56■□□□□ 0.72
CCS-204ENST00000526066 ARHGEF16Q5VV41 709 aa19.56■□□□□ 0.72
CCS-204ENST00000526066 TBCKQ8TEA7 893 aa19.56■□□□□ 0.72
CCS-204ENST00000526066 PDCD2LQ9BRP1 358 aa19.56■□□□□ 0.72
CCS-204ENST00000526066 NOL7Q9UMY1 257 aaKnown RBP19.56■□□□□ 0.72
CCS-204ENST00000526066 TRIP12Q14669 1992 aaPredicted RBP19.55■□□□□ 0.72
CCS-204ENST00000526066 FAM205CA6NFA0 338 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 EPOPA6NHQ4 379 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 SELPP16109 830 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 ARHGAP4P98171 946 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 GRB10Q13322 594 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 PGM5Q15124 567 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 INF2Q27J81 1249 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 RILPL1Q5EBL4 403 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 PCNX4Q63HM2 1172 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 SEPT14Q6ZU15 432 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 LRRC8DQ7L1W4 858 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 NEK8Q86SG6 692 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 C7orf31Q8N865 590 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 AFG1LQ8WV93 481 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 ARIH1Q9Y4X5 557 aaPredicted RBP19.55■□□□□ 0.72
CCS-204ENST00000526066 COL4A4P53420 1690 aaPredicted RBP19.55■□□□□ 0.72
CCS-204ENST00000526066 TRANK1O15050 2925 aa19.55■□□□□ 0.72
CCS-204ENST00000526066 EFCAB14O75071 495 aa19.54■□□□□ 0.72
CCS-204ENST00000526066 MMP3P08254 477 aa19.54■□□□□ 0.72
CCS-204ENST00000526066 EIF2AK2P19525 551 aaKnown RBP19.54■□□□□ 0.72
CCS-204ENST00000526066 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
CCS-204ENST00000526066 CIITAP33076 1130 aa19.54■□□□□ 0.72
CCS-204ENST00000526066 WDR5P61964 334 aaKnown RBP19.54■□□□□ 0.72
CCS-204ENST00000526066 MYSM1Q5VVJ2 828 aa19.54■□□□□ 0.72
CCS-204ENST00000526066 CNKSR3Q6P9H4 555 aa19.54■□□□□ 0.72
CCS-204ENST00000526066 MOXD1Q6UVY6 613 aa19.54■□□□□ 0.72
CCS-204ENST00000526066 NAP1L4Q99733 375 aaKnown RBP19.54■□□□□ 0.72
CCS-204ENST00000526066 KATNAL1Q9BW62 490 aa19.54■□□□□ 0.72
CCS-204ENST00000526066 ATP6V1DQ9Y5K8 247 aa19.54■□□□□ 0.72
CCS-204ENST00000526066 EDIL3O43854 480 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 STAM2O75886 525 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 NR3C2P08235 984 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 GCFC2P16383 781 aaKnown RBP19.53■□□□□ 0.72
CCS-204ENST00000526066 CCND2P30279 289 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 ORC2Q13416 577 aaPredicted RBP19.53■□□□□ 0.72
CCS-204ENST00000526066 STXBP2Q15833 593 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 DGKDQ16760 1214 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 TMEM31Q5JXX7 168 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 FOXD4L5Q5VV16 416 aaPredicted RBP19.53■□□□□ 0.72
CCS-204ENST00000526066 VSIG10LQ86VR7 867 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 SESTD1Q86VW0 696 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 FOXD4L4Q8WXT5 416 aaPredicted RBP19.53■□□□□ 0.72
CCS-204ENST00000526066 LMCD1Q9NZU5 365 aa19.53■□□□□ 0.72
CCS-204ENST00000526066 TET1Q8NFU7 2136 aa19.52■□□□□ 0.72
CCS-204ENST00000526066 CYP3A7-CYP3A51PA0A087WV96 503 aa19.52■□□□□ 0.72
CCS-204ENST00000526066 ABHD14A-ACY1A0A1B0GW23 586 aa19.52■□□□□ 0.72
CCS-204ENST00000526066 ARIH2O95376 493 aa19.52■□□□□ 0.72
CCS-204ENST00000526066 CYP3A7P24462 503 aa19.52■□□□□ 0.72
CCS-204ENST00000526066 TOB1P50616 345 aaPredicted RBP19.52■□□□□ 0.72
CCS-204ENST00000526066 PPP4R3AQ6IN85 833 aa19.52■□□□□ 0.72
CCS-204ENST00000526066 GDF6Q6KF10 455 aaPredicted RBP19.52■□□□□ 0.72
CCS-204ENST00000526066 IL31RAQ8NI17 732 aa19.52■□□□□ 0.72
CCS-204ENST00000526066 MBOAT7Q96N66 472 aa19.52■□□□□ 0.72
CCS-204ENST00000526066 KIAA1217Q5T5P2 1943 aa19.51■□□□□ 0.71
CCS-204ENST00000526066 MRPS9P82933 396 aaKnown RBP19.51■□□□□ 0.71
CCS-204ENST00000526066 IKBKEQ14164 716 aa19.51■□□□□ 0.71
CCS-204ENST00000526066 LY6KQ17RY6 165 aa19.51■□□□□ 0.71
CCS-204ENST00000526066 ATL3Q6DD88 541 aa19.51■□□□□ 0.71
CCS-204ENST00000526066 CCDC62Q6P9F0 684 aa19.51■□□□□ 0.71
CCS-204ENST00000526066 GDPD5Q8WTR4 605 aa19.51■□□□□ 0.71
CCS-204ENST00000526066 TGS1Q96RS0 853 aaKnown RBP19.51■□□□□ 0.71
CCS-204ENST00000526066 RAD9AQ99638 391 aa19.51■□□□□ 0.71
CCS-204ENST00000526066 MTUS1Q9ULD2 1270 aa19.51■□□□□ 0.71
CCS-204ENST00000526066 EIF3JO75822 258 aaKnown RBP19.5■□□□□ 0.71
CCS-204ENST00000526066 ARHGEF15O94989 841 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 ARHGAP1Q07960 439 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 LETM2Q2VYF4 491 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 CEP55Q53EZ4 464 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 TTC38Q5R3I4 469 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 NIPA1Q7RTP0 329 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 ZNF396Q96N95 335 aaPredicted RBP19.5■□□□□ 0.71
CCS-204ENST00000526066 LRFN3Q9BTN0 628 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 GTF2IRD1Q9UHL9 959 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 UBIAD1Q9Y5Z9 338 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 MRVI1Q9Y6F6 885 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 PTPRSQ13332 1948 aa19.5■□□□□ 0.71
CCS-204ENST00000526066 LCHNA4D1U4 455 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 GJB5O95377 273 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 CKBP12277 381 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 MYCLP12524 364 aaPredicted RBP19.49■□□□□ 0.71
CCS-204ENST00000526066 ZNF76P36508 570 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 PSEN2P49810 448 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 RBL2Q08999 1139 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 LAMC2Q13753 1193 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 FAM173BQ6P4H8 233 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 DHX37Q8IY37 1157 aaKnown RBP19.49■□□□□ 0.71
CCS-204ENST00000526066 INPP4AQ96PE3 977 aaPredicted RBP19.49■□□□□ 0.71
CCS-204ENST00000526066 MXRA8Q9BRK3 442 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 EPHX3Q9H6B9 360 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 JADE2Q9NQC1 790 aa19.49■□□□□ 0.71
CCS-204ENST00000526066 IGLV3-22A0A075B6J6 115 aa19.48■□□□□ 0.71
CCS-204ENST00000526066 FAM86B1E9PN63 330 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms