RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 F8W031 263 aaPredicted RBP5.99□□□□□ -1.45
USP48-211ENST00000526044 ADCY3O60266 1144 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 DIAPH1O60610 1272 aaKnown RBP5.99□□□□□ -1.45
USP48-211ENST00000526044 TOM1O60784 492 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 KRT1P04264 644 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 MED14OSP0DP75 135 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 DLG4P78352 724 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 NFE2L2Q16236 605 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 LONRF2Q1L5Z9 754 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 YOD1Q5VVQ6 348 aaPredicted RBP5.99□□□□□ -1.45
USP48-211ENST00000526044 ZC3H14Q6PJT7 736 aaKnown RBP5.99□□□□□ -1.45
USP48-211ENST00000526044 CEP68Q76N32 757 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 TMC6Q7Z403 805 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 SCUBE1Q8IWY4 988 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 NETO2Q8NC67 525 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 PLEKHO2Q8TD55 490 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 DNAJC7Q99615 494 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 CDC6Q99741 560 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 SLC12A5Q9H2X9 1139 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 PANK3Q9H999 370 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 BTG4Q9NY30 223 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 FBLN5Q9UBX5 448 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 NUDT5Q9UKK9 219 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 PCDHA2Q9Y5H9 948 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 LTBP4Q8N2S1 1624 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 ADGRL3Q9HAR2 1447 aa5.99□□□□□ -1.45
USP48-211ENST00000526044 ZC3H12DA2A288 527 aaKnown RBP5.98□□□□□ -1.45
USP48-211ENST00000526044 C22orf46C9J442 243 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 NUAK1O60285 661 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 FAM153BP0C7A2 387 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 LCP1P13796 627 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 BCL6P41182 706 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 LSAMPQ13449 338 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 PLEKHN1Q494U1 663 aaPredicted RBP5.98□□□□□ -1.45
USP48-211ENST00000526044 WWC2Q6AWC2 1192 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 RSPO2Q6UXX9 243 aaPredicted RBP5.98□□□□□ -1.45
USP48-211ENST00000526044 USP53Q70EK8 1073 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 DPH6Q7L8W6 267 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 HDGFL2Q7Z4V5 671 aaPredicted RBP5.98□□□□□ -1.45
USP48-211ENST00000526044 TEX2Q8IWB9 1127 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 NGDNQ8NEJ9 315 aaKnown RBP5.98□□□□□ -1.45
USP48-211ENST00000526044 DCAF4Q8WV16 495 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 RELTQ969Z4 430 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 TRMT2BQ96GJ1 504 aaKnown RBP5.98□□□□□ -1.45
USP48-211ENST00000526044 PEX11GQ96HA9 241 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 CHAMP1Q96JM3 812 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 ORAI2Q96SN7 254 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 SGPP1Q9BX95 441 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 CNTD2Q9H8S5 307 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 GCM1Q9NP62 436 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 GPR27Q9NS67 375 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 TERF2IPQ9NYB0 399 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 MBD1Q9UIS9 605 aaPredicted RBP5.98□□□□□ -1.45
USP48-211ENST00000526044 NALCNQ8IZF0 1738 aa5.98□□□□□ -1.45
USP48-211ENST00000526044 FMN2Q9NZ56 1722 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 NTRK1P04629 796 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 HSP90B1P14625 803 aaKnown RBP5.97□□□□□ -1.45
USP48-211ENST00000526044 PRR5P85299 388 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 ZC3H12BQ5HYM0 836 aaKnown RBP5.97□□□□□ -1.45
USP48-211ENST00000526044 MROH9Q5TGP6 573 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 TMEM169Q96HH4 297 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 CHMP4AQ9BY43 222 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 ZSWIM4Q9H7M6 989 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 CD320Q9NPF0 282 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 X6R8D5 127 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 TULP4Q9NRJ4 1543 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 ANKARQ7Z5J8 1434 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 ADGRB2O60241 1585 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 ACEP12821 1306 aa5.97□□□□□ -1.45
USP48-211ENST00000526044 TRBV23-1A0A0A0MS06 115 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 H7BY64 318 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 ZBTB7AO95365 584 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 BMS1Q14692 1282 aaKnown RBP5.96□□□□□ -1.46
USP48-211ENST00000526044 SLC9A5Q14940 896 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 NTRK3Q16288 839 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 FAM209AQ5JX71 171 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 LDHDQ86WU2 507 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 RIOX2Q8IUF8 465 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 Q8N1Y9 231 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 MRFAP1L1Q96HT8 127 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 ZFYVE21Q9BQ24 234 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 PHF20Q9BVI0 1012 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 LNPKQ9C0E8 428 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 RXFP1Q9HBX9 757 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 SMG5Q9UPR3 1016 aaKnown RBP5.96□□□□□ -1.46
USP48-211ENST00000526044 HCFC2Q9Y5Z7 792 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 DCCP43146 1447 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 PPIP5K1Q6PFW1 1433 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 CDC42BPGQ6DT37 1551 aa5.96□□□□□ -1.46
USP48-211ENST00000526044 NINLQ9Y2I6 1382 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 BLACEA4D250 179 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 N4BP3O15049 544 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 HOXA5P20719 270 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 FPR2P25090 351 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 CDR1P51861 262 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 SUMO1P63165 101 aaKnown RBP5.95□□□□□ -1.46
USP48-211ENST00000526044 ZNF200P98182 395 aaPredicted RBP5.95□□□□□ -1.46
USP48-211ENST00000526044 ITSN1Q15811 1721 aa5.95□□□□□ -1.46
USP48-211ENST00000526044 CCDC144BQ3MJ40 725 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms