RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PPP1R12CQ9BZL4 782 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 TUT1Q9H6E5 874 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 POLD4Q9HCU8 107 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ZNF302Q9NR11 478 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 DISC1Q9NRI5 854 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 TBC1D22BQ9NU19 505 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 POLR3EQ9NVU0 708 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 VAV3Q9UKW4 847 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 PCDHA12Q9UN75 941 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 TRPC6Q9Y210 931 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 NFASCO94856 1347 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 VWA3AA6NCI4 1184 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 DDX11L8A8MPP1 907 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 WDR64B1ANS9 1081 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 HAS3O00219 553 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 TREHO43280 583 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 PPFIA4O75335 1185 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 MED24O75448 989 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 ATG7O95352 703 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 F2P00734 622 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 PSAPP07602 524 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 INSRRP14616 1297 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 NCLP19338 710 aaKnown RBP5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 CYP2C18P33260 490 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 CDK7P50613 346 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 CCL23P55773 120 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 NPEPPSP55786 919 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 NKX3-2P78367 333 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 MDM2Q00987 491 aaPredicted RBP5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 KRT76Q01546 638 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 MLLT1Q03111 559 aaPredicted RBP5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 DNM1Q05193 864 aaKnown RBP5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 TMEM62Q0P6H9 643 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 FAAP100Q0VG06 881 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 PLCB4Q15147 1175 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 ECM1Q16610 540 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 MTERF2Q49AM1 385 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 ZNF746Q6NUN9 644 aaPredicted RBP5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 MOXD1Q6UVY6 613 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 RUFY4Q6ZNE9 571 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 USP49Q70CQ1 688 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 BRAPQ7Z569 592 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 TPH2Q8IWU9 490 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 FAM126BQ8IXS8 530 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 GIMAP8Q8ND71 665 aaPredicted RBP5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 PIGOQ8TEQ8 1089 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 SCLYQ96I15 445 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 FAM20AQ96MK3 541 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 CLIC6Q96NY7 704 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 CTAGE1Q96RT6 745 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 RIT2Q99578 217 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 EIF2AK1Q9BQI3 630 aaKnown RBP5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 OSBPL7Q9BZF2 842 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 SMARCAD1Q9H4L7 1026 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 AZI2Q9H6S1 392 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 GDPD2Q9HCC8 539 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 SEPT9Q9UHD8 586 aaPredicted RBP5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 PCDHA10Q9Y5I2 948 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 BRCA2P51587 3418 aa5.18□□□□□ -1.58
CHMP4A-202ENST00000524955 IGKV6D-21A0A0A0MT36 114 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 POTEB3A0JP26 581 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 C17orf102A2RUQ5 167 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 DCDC2CA8MYV0 355 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 H0YGN5 161 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 KPNA6O60684 536 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 LGR5O75473 907 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 CABYRO75952 493 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 SLITRK3O94933 977 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 BRD1O95696 1058 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 CTSHP09668 335 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 HOXD8P13378 290 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 CCT6AP40227 531 aaKnown RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 RGS19P49795 217 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 JAK3P52333 1124 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 ATP2C1P98194 919 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 PRKCEQ02156 737 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 PPFIA1Q13136 1202 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 PPP2R5CQ13362 524 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 DHX8Q14562 1220 aaKnown RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 PTPAQ15257 358 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 EPHA7Q15375 998 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 GRIK4Q16099 956 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 PTGISQ16647 500 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 RILPL1Q5EBL4 403 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 MARCH8Q5T0T0 291 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 FAM160B1Q5W0V3 765 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 POTEBQ6S5H4 581 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 POTEGQ6S5H5 508 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 B3GNT9Q6UX72 402 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 MAEAQ7L5Y9 396 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 TEX2Q8IWB9 1127 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 SMAP1Q8IYB5 467 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 SLFN12Q8IYM2 578 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 LRRC71Q8N4P6 559 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 SLC43A3Q8NBI5 491 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 SNX29Q8TEQ0 813 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 LMBR1Q8WVP7 490 aa5.17□□□□□ -1.58
CHMP4A-202ENST00000524955 DHX38Q92620 1227 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms