RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 POTEB3A0JP26 581 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 HMGB1P1B2RPK0 211 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-202ENST00000524773 POTECB2RU33 542 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 RPS8P62241 208 aaKnown RBP14.41□□□□□ -0.1
CAPN1-202ENST00000524773 FKBP3Q00688 224 aaKnown RBP14.41□□□□□ -0.1
CAPN1-202ENST00000524773 KCNH2Q12809 1159 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 KRT79Q5XKE5 535 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 TBC1D9BQ66K14 1250 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 POTEBQ6S5H4 581 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 MICALCLQ6ZW33 695 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 DNAJC19Q96DA6 116 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 OSGEPQ9NPF4 335 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 SLC12A6Q9UHW9 1150 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 PNMA2Q9UL42 364 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 PCDHGC5Q9Y5F6 944 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 RASSF9O75901 435 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 CDC25CP30307 473 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 ADAM9Q13443 819 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 SBK1Q52WX2 424 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 C6orf89Q6UWU4 347 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 RBM46Q8TBY0 533 aaKnown RBP14.41□□□□□ -0.1
CAPN1-202ENST00000524773 WHAMMQ8TF30 809 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 SPAG5Q96R06 1193 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 ISCUQ9H1K1 167 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 USP21Q9UK80 565 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 SUFUQ9UMX1 484 aa14.41□□□□□ -0.1
CAPN1-202ENST00000524773 TAL1P17542 331 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-202ENST00000524773 ABCB4P21439 1286 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 GNAQP50148 359 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 LRRC63Q05C16 580 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 TTBK2Q6IQ55 1244 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 CYB5D1Q6P9G0 228 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 CPLX4Q7Z7G2 160 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 GIMAP7Q8NHV1 300 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 GLG1Q92896 1179 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 TPX2Q9ULW0 747 aaKnown RBP14.4□□□□□ -0.1
CAPN1-202ENST00000524773 CASZ1Q86V15 1759 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 SPATA31A6Q5VVP1 1343 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 FOXO6A8MYZ6 492 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 CCDC172P0C7W6 258 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 GNA11P29992 359 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 SLCO1A2P46721 670 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 CDR1P51861 262 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 PLCB1Q9NQ66 1216 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.4□□□□□ -0.11e-7■■■■■ 67.7
CAPN1-202ENST00000524773 RBAK-RBAKDNI3L0D1 243 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 TRAPPC3O43617 180 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 CAND2O75155 1236 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 SKAP2O75563 359 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-202ENST00000524773 LDHBP07195 334 aaKnown RBP14.4□□□□□ -0.1
CAPN1-202ENST00000524773 IFNAR2P48551 515 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 CDK8P49336 464 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 KCNA1Q09470 495 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 ANKRD20A8PQ5CZ79 823 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 FUKQ8N0W3 1084 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 MREGQ8N565 214 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 SCFD1Q8WVM8 642 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 SELENOSQ9BQE4 189 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 MAGEF1Q9HAY2 307 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 ANKIB1Q9P2G1 1089 aa14.4□□□□□ -0.1
CAPN1-202ENST00000524773 CLIC2O15247 247 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
CAPN1-202ENST00000524773 SCTRP47872 440 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 SMTNP53814 917 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 IFFO1Q0D2I5 559 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 ACCSLQ4AC99 568 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 ZCWPW2Q504Y3 356 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 DAAM2Q86T65 1068 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 CERKQ8TCT0 537 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 NLRP3Q96P20 1036 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 MYH1P12882 1939 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 PVALEFA0A1B0GWK0 134 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 SFI1A8K8P3 1242 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 FGFR1OPO95684 399 aaKnown RBP14.39□□□□□ -0.11
CAPN1-202ENST00000524773 NR2F2P24468 414 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 PPP2R2AP63151 447 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 TMEM266Q2M3C6 531 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 CCDC38Q502W7 563 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 ALKBH5Q6P6C2 394 aaKnown RBP14.39□□□□□ -0.11
CAPN1-202ENST00000524773 PEX26Q7Z412 305 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 GPBP1Q86WP2 473 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 CD302Q8IX05 232 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 PARP9Q8IXQ6 854 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 U2AF1L4Q8WU68 220 aaKnown RBP14.39□□□□□ -0.11
CAPN1-202ENST00000524773 HAS1Q92839 578 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 TSKSQ9UJT2 592 aa14.39□□□□□ -0.11
CAPN1-202ENST00000524773 POTEFA5A3E0 1075 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 EIF4E1BA6NMX2 242 aaKnown RBP14.38□□□□□ -0.11
CAPN1-202ENST00000524773 CHUKO15111 745 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 POTEIP0CG38 1075 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 CASP4P49662 377 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 PSMC6P62333 389 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 PICALMQ13492 652 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 FAM133BQ5BKY9 247 aaKnown RBP14.38□□□□□ -0.11
CAPN1-202ENST00000524773 POTEGQ6S5H5 508 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 POTEEQ6S8J3 1075 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 IRF2BP2Q7Z5L9 587 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 KSR1Q8IVT5 923 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 TRIM59Q8IWR1 403 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 GANQ9H2C0 597 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms