RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 PCDHA11Q9Y5I1 949 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 COL6A3P12111 3177 aa12.48□□□□□ -0.41
CTSB-207ENST00000524654 RBAK-RBAKDNI3L0D1 243 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 INSRRP14616 1297 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 SLC26A2P50443 739 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 STAT5BP51692 787 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 NEK4P51957 841 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 WDR5P61964 334 aaKnown RBP12.47□□□□□ -0.41
CTSB-207ENST00000524654 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
CTSB-207ENST00000524654 PLCB4Q15147 1175 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 C8orf34Q49A92 452 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 PRR16Q569H4 304 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 FAM26DQ5JW98 314 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 TAF2Q6P1X5 1199 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 RUFY4Q6ZNE9 571 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 BLIDQ8IZY5 108 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 PHF20Q9BVI0 1012 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 NKX2-4Q9H2Z4 354 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 TUBE1Q9UJT0 475 aa12.47□□□□□ -0.41
CTSB-207ENST00000524654 TANC1Q9C0D5 1861 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 CDH23Q9H251 3354 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 CYP3A7-CYP3A51PA0A087WV96 503 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 ABHD14A-ACY1A0A1B0GW23 586 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 RRN3P2A6NIE6 340 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 DDX39AO00148 427 aaKnown RBP12.46□□□□□ -0.41
CTSB-207ENST00000524654 DTNBO60941 627 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 LARGE1O95461 756 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 CTSHP09668 335 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 MYOGP15173 224 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 CYP3A7P24462 503 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 PLEKHG4Q58EX7 1191 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 ZNF746Q6NUN9 644 aaPredicted RBP12.46□□□□□ -0.41
CTSB-207ENST00000524654 HERC6Q8IVU3 1022 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 CCDC60Q8IWA6 550 aaPredicted RBP12.46□□□□□ -0.41
CTSB-207ENST00000524654 NECAB1Q8N987 351 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 MYLIPQ8WY64 445 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 GTF3C6Q969F1 213 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 UIMC1Q96RL1 719 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 SLC28A3Q9HAS3 691 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 KCNJ14Q9UNX9 436 aa12.46□□□□□ -0.41
CTSB-207ENST00000524654 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 MSH4O15457 936 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 EFCAB14O75071 495 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 CHRNA1P02708 482 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 FDPSP14324 419 aaKnown RBP12.45□□□□□ -0.42
CTSB-207ENST00000524654 KCNJ6P48051 423 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 DEFB103AP81534 67 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 KRT76Q01546 638 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 IKBKEQ14164 716 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 Q4G0T1 1027 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 MIS18BP1Q6P0N0 1132 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
CTSB-207ENST00000524654 DBF4BQ8NFT6 615 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
CTSB-207ENST00000524654 ZBTB10Q96DT7 871 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 RIT2Q99578 217 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 GJB4Q9NTQ9 266 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
CTSB-207ENST00000524654 BACH1O14867 736 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 CA3P07451 260 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 XBP1P17861 261 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 ATP4AP20648 1035 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 IGBP1P78318 339 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 MGAT3Q09327 533 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 NONOQ15233 471 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTSB-207ENST00000524654 FAM160B1Q5W0V3 765 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 PPP2R2DQ66LE6 453 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 MOXD1Q6UVY6 613 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 KRT25Q7Z3Z0 450 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 NSUN7Q8NE18 718 aaKnown RBP12.44□□□□□ -0.42
CTSB-207ENST00000524654 ATP8B4Q8TF62 1192 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 TRAPPC12Q8WVT3 735 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 DNAJB3Q8WWF6 145 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 KIF2CQ99661 725 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 ZNF302Q9NR11 478 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
CTSB-207ENST00000524654 PCDHA2Q9Y5H9 948 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 PCDHA10Q9Y5I2 948 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 MAFBQ9Y5Q3 323 aaPredicted RBP12.44□□□□□ -0.42
CTSB-207ENST00000524654 MYH7BA7E2Y1 1941 aa12.44□□□□□ -0.42
CTSB-207ENST00000524654 ZBTB42B2RXF5 422 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 HBP1O60381 514 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 PSMD10O75832 226 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 TDP2O95551 362 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 RPLP2P05387 115 aaKnown RBP12.43□□□□□ -0.42
CTSB-207ENST00000524654 PSAPP07602 524 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 FOSL2P15408 326 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 ST3GAL1Q11201 340 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 MTHFD1LQ6UB35 978 aa12.43□□□□□ -0.42
CTSB-207ENST00000524654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.43□□□□□ -0.42
CTSB-207ENST00000524654 TMCO2Q7Z6W1 182 aaPredicted RBP12.43□□□□□ -0.42
CTSB-207ENST00000524654 RSPH3Q86UC2 560 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms