RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 NENFQ9UMX5 172 aa9.8□□□□□ -0.84
PKP3-202ENST00000524646 TRAF3IP3Q9Y228 551 aa9.8□□□□□ -0.84
PKP3-202ENST00000524646 PCDHA1Q9Y5I3 950 aa9.8□□□□□ -0.84
PKP3-202ENST00000524646 ASTN1O14525 1302 aa9.8□□□□□ -0.84
PKP3-202ENST00000524646 UBE4BO95155 1302 aa9.8□□□□□ -0.84
PKP3-202ENST00000524646 A0A087X0T9 212 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L15C9J2P7 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L13C9JLJ4 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L11C9JVI0 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L18D6R9N7 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L22D6RA61 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L17D6RBQ6 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L19D6RCP7 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L20D6RJB6 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 TBCAO75347 108 aaKnown RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 HEXIM1O94992 359 aaKnown RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 FTCDO95954 541 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 FOSP01100 380 aaPredicted RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 FAM228BP0C875 321 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 MYBP10242 640 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 EEF2P13639 858 aaKnown RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 KLRC1P26715 233 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 PRKCIP41743 596 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 MATR3P43243 847 aaKnown RBP eCLIP9.79□□□□□ -0.84
PKP3-202ENST00000524646 CRKP46108 304 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 SCNN1DP51172 638 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 NAP1L1P55209 391 aaKnown RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 SKOR1P84550 965 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 SLC7A5Q01650 507 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L24Q0WX57 530 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 KCNH2Q12809 1159 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 NFIAQ12857 509 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 ADAM9Q13443 819 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 IFI16Q16666 785 aaKnown RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 APOBEC3HQ6NTF7 200 aaKnown RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 USP17L6PQ6QN14 398 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 FAM133AQ8N9E0 248 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 GMCL1P1Q8NEA9 526 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 TBC1D5Q92609 795 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 TAF4BQ92750 862 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 MKL1Q969V6 931 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 LENG9Q96B70 501 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 ZBTB9Q96C00 473 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 ZDHHC15Q96MV8 337 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 TRERF1Q96PN7 1200 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 REEP2Q9BRK0 252 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 AMNQ9BXJ7 453 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 TRIM34Q9BYJ4 488 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 RASSF4Q9H2L5 321 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 TYW1Q9NV66 732 aaKnown RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 ARMCX3Q9UH62 379 aaPredicted RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 BZW2Q9Y6E2 419 aaKnown RBP9.79□□□□□ -0.84
PKP3-202ENST00000524646 NCANO14594 1321 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 GRIN2DO15399 1336 aa9.79□□□□□ -0.84
PKP3-202ENST00000524646 ATRNL1Q5VV63 1379 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 ZMYM2Q9UBW7 1377 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 PDXKO00764 312 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 MEIS2O14770 477 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 NPM3O75607 178 aaKnown RBP9.78□□□□□ -0.84
PKP3-202ENST00000524646 GFPT2O94808 682 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 NR3C1P04150 777 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 NPR1P16066 1061 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 GAP43P17677 238 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 RPA1P27694 616 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 CIITAP33076 1130 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 CASP5P51878 434 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 FKBP1AP62942 108 aaKnown RBP9.78□□□□□ -0.84
PKP3-202ENST00000524646 ICA1Q05084 483 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 GIT2Q14161 759 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 EPHA7Q15375 998 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 KNOP1Q1ED39 458 aaKnown RBP9.78□□□□□ -0.84
PKP3-202ENST00000524646 KIAA0753Q2KHM9 967 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 PRR16Q569H4 304 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 SYDE2Q5VT97 1194 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 DPY19L2P1Q6NXN4 242 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 FOXR1Q6PIV2 292 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 TMEM179Q6ZVK1 233 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 TEX2Q8IWB9 1127 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 SYT2Q8N9I0 419 aaPredicted RBP9.78□□□□□ -0.84
PKP3-202ENST00000524646 WHAMMQ8TF30 809 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 GMCL1Q96IK5 515 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 MS4A14Q96JA4 679 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 GJD4Q96KN9 370 aaPredicted RBP9.78□□□□□ -0.84
PKP3-202ENST00000524646 FAM20AQ96MK3 541 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.78□□□□□ -0.84
PKP3-202ENST00000524646 PACSIN1Q9BY11 444 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 ZC3H12CQ9C0D7 883 aaKnown RBP9.78□□□□□ -0.84
PKP3-202ENST00000524646 FAM107BQ9H098 131 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 ZHX3Q9H4I2 956 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 KANSL2Q9H9L4 492 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
PKP3-202ENST00000524646 LCMT1Q9UIC8 334 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 FBXL5Q9UKA1 691 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 FRMPD4Q14CM0 1322 aa9.78□□□□□ -0.84
PKP3-202ENST00000524646 TNS1Q9HBL0 1735 aaKnown RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 A0A0A6YYK5 440 aaPredicted RBP9.77□□□□□ -0.85
PKP3-202ENST00000524646 GTPBP10A4D1E9 387 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms