RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 TNNC1P63316 161 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 ATP2B2Q01814 1243 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 KCNH2Q12809 1159 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 RAPGEF1Q13905 1077 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 TTBK2Q6IQ55 1244 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 CD302Q8IX05 232 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 CRYGNQ8WXF5 182 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 CAPS2Q9BXY5 557 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 METTL14Q9HCE5 456 aaKnown RBP9.12□□□□□ -0.95
CHD7-202ENST00000524602 NYAP2Q9P242 653 aa9.12□□□□□ -0.95
CHD7-202ENST00000524602 POTEB3A0JP26 581 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 POTECB2RU33 542 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 PDXKO00764 312 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 SLC16A3O15427 465 aaKnown RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 FOSP01100 380 aaPredicted RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 RPA1P27694 616 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 MATR3P43243 847 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD7-202ENST00000524602 CORO7P57737 925 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 SLC7A5Q01650 507 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 BMT2Q1RMZ1 405 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 SKIDA1Q1XH10 827 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 KIAA0753Q2KHM9 967 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 POTEBQ6S5H4 581 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 ANKRD13CQ8N6S4 541 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 PBKQ96KB5 322 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 FAM20AQ96MK3 541 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 INPP4AQ96PE3 977 aaPredicted RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 LCMT1Q9UIC8 334 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 PCDHA1Q9Y5I3 950 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 AFPP02771 609 aaKnown RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 MMP10P09238 476 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 NR2F2P24468 414 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 HMGB2P26583 209 aaKnown RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 KLRC1P26715 233 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 PRKCIP41743 596 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 IRAK1P51617 712 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 CDC37Q16543 378 aaPredicted RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 QRICH1Q2TAL8 776 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 EMC10Q5UCC4 262 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 KCTD1Q719H9 257 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 EPM2AIP1Q7L775 607 aaPredicted RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 NELFCDQ8IXH7 590 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 SYT2Q8N9I0 419 aaPredicted RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 ETNPPLQ8TBG4 499 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 TAF4BQ92750 862 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 ARMCX3Q9UH62 379 aaPredicted RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 HDAC9Q9UKV0 1011 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 DNM3Q9UQ16 869 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 A0A087X0T9 212 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 GTPBP10A4D1E9 387 aaKnown RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 RIMBP2O15034 1052 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 FAM228BP0C875 321 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 RPL13P26373 211 aaKnown RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 SLC16A2P36021 539 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 SPIRE1Q08AE8 756 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 FAM133AQ8N9E0 248 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 TEKT1Q969V4 418 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 CALR3Q96L12 384 aaKnown RBP9.11□□□□□ -0.95
CHD7-202ENST00000524602 PSMB7Q99436 277 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD7-202ENST00000524602 MRIQ9BWK5 157 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 FGFBP2Q9BYJ0 223 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 TMEM59LQ9UK28 342 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 INTUQ9ULD6 942 aa9.11□□□□□ -0.95
CHD7-202ENST00000524602 MPHOSPH10O00566 681 aaKnown RBP9.1□□□□□ -0.95
CHD7-202ENST00000524602 EIF3HO15372 352 aaKnown RBP eCLIP9.1□□□□□ -0.951e-6■■■■□ 19.3
CHD7-202ENST00000524602 MED24O75448 989 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 GFPT2O94808 682 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 HEXIM1O94992 359 aaKnown RBP9.1□□□□□ -0.95
CHD7-202ENST00000524602 GIT2Q14161 759 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 CDC42EP5Q6NZY7 148 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 VPS36Q86VN1 386 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 CLEC10AQ8IUN9 316 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 EFCAB13Q8IY85 973 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP38Q8NB14 1042 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 PPM1EQ8WY54 764 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 KANSL2Q9H9L4 492 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 TBC1D7Q9P0N9 293 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 SIPA1L1O43166 1804 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 A0A0A6YYK5 440 aaPredicted RBP9.1□□□□□ -0.95
CHD7-202ENST00000524602 SHTN1A0MZ66 631 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 FLOT1O75955 427 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 MYBP10242 640 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 XRCC5P13010 732 aaKnown RBP9.1□□□□□ -0.95
CHD7-202ENST00000524602 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 FOXR1Q6PIV2 292 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 IRF2BP2Q7Z5L9 587 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 FMNL3Q8IVF7 1028 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 IQCKQ8N0W5 287 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 CERS5Q8N5B7 392 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 TSEN2Q8NCE0 465 aaKnown RBP9.1□□□□□ -0.95
CHD7-202ENST00000524602 ACTRT1Q8TDG2 376 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 LMBR1Q8WVP7 490 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 ZC3H12CQ9C0D7 883 aaKnown RBP9.1□□□□□ -0.95
CHD7-202ENST00000524602 TYW1Q9NV66 732 aaKnown RBP9.1□□□□□ -0.95
CHD7-202ENST00000524602 ADAMTS1Q9UHI8 967 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 DAAM1Q9Y4D1 1078 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms