RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 ADCY7P51828 1080 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 NAPAP54920 295 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 MGAT3Q09327 533 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 GPM6BQ13491 265 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 CEP55Q53EZ4 464 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 TSHZ1Q6ZSZ6 1077 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 FIBCD1Q8N539 461 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 FTHL17Q9BXU8 183 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 LRRC2Q9BYS8 371 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 LMAN2LQ9H0V9 348 aa13.53□□□□□ -0.24
SPARC-206ENST00000524277 BRWD1Q9NSI6 2320 aa13.52□□□□□ -0.24
SPARC-206ENST00000524277 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 C5orf67F2Z3F1 127 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 M0QZ92 97 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 ENPP3O14638 875 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 STAT5BP51692 787 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 MRPS6P82932 125 aaKnown RBP13.52□□□□□ -0.25
SPARC-206ENST00000524277 FBXO47Q5MNV8 452 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 WWC2Q6AWC2 1192 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 RUFY4Q6ZNE9 571 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 NIPA1Q7RTP0 329 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 NECAB3Q96P71 396 aaPredicted RBP13.52□□□□□ -0.25
SPARC-206ENST00000524277 C11orf84Q9BUA3 381 aaPredicted RBP13.52□□□□□ -0.25
SPARC-206ENST00000524277 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
SPARC-206ENST00000524277 BARHL2Q9NY43 387 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 FAM50BQ9Y247 325 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 TELO2Q9Y4R8 837 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 PCDHA2Q9Y5H9 948 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 V9GY48 417 aaPredicted RBP13.52□□□□□ -0.25
SPARC-206ENST00000524277 CNTNAP5Q8WYK1 1306 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 SIP14410 1827 aa13.52□□□□□ -0.25
SPARC-206ENST00000524277 TCF20Q9UGU0 1960 aaKnown RBP13.52□□□□□ -0.25
SPARC-206ENST00000524277 SMCO2A6NFE2 343 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 MEIS1O00470 390 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 ATG7O95352 703 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 GHRP10912 638 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 INSRRP14616 1297 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 MARK3P27448 753 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 SREBF1P36956 1147 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 FUT2Q10981 343 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 LPIN1Q14693 890 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 BANK1Q8NDB2 785 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 CCDC12Q8WUD4 166 aaPredicted RBP13.51□□□□□ -0.25
SPARC-206ENST00000524277 DNAJB3Q8WWF6 145 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 PLVAPQ9BX97 442 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 ANO3Q9BYT9 981 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 NSUN3Q9H649 340 aaKnown RBP13.51□□□□□ -0.25
SPARC-206ENST00000524277 TRPC6Q9Y210 931 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 CDY2AQ9Y6F7 541 aa13.51□□□□□ -0.25
SPARC-206ENST00000524277 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 GOLGA8AA7E2F4 631 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 GOLGA8BA8MQT2 603 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 STXBP3O00186 592 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 CDC45O75419 566 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 STAG3L1P0CL83 205 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 ZNF76P36508 570 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 BMPR1AP36894 532 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 ACTR2P61160 394 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 FGD1P98174 961 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 NAALADL2Q58DX5 795 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 ODR4Q5SWX8 454 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 FAM160B1Q5W0V3 765 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 CLP1Q92989 425 aaKnown RBP13.5□□□□□ -0.25
SPARC-206ENST00000524277 PABPC5Q96DU9 382 aaKnown RBP13.5□□□□□ -0.25
SPARC-206ENST00000524277 PCYT2Q99447 389 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 OSBPL7Q9BZF2 842 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 AGO4Q9HCK5 861 aaKnown RBP13.5□□□□□ -0.25
SPARC-206ENST00000524277 PKD2L1Q9P0L9 805 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
SPARC-206ENST00000524277 TRPV2Q9Y5S1 764 aa13.5□□□□□ -0.25
SPARC-206ENST00000524277 ADGRA3Q8IWK6 1321 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 IGKV6D-21A0A0A0MT36 114 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 KLF18A0A0U1RQI7 1052 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 ESYT2A0FGR8 921 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 POTEB3A0JP26 581 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 HBP1O60381 514 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 CYP3A4P08684 503 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 KCNA5P22460 613 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 CLK2P49760 499 aaKnown RBP13.49□□□□□ -0.25
SPARC-206ENST00000524277 IGBP1P78318 339 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
SPARC-206ENST00000524277 PLCB4Q15147 1175 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 POTEBQ6S5H4 581 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 ZNF689Q96CS4 500 aaPredicted RBP13.49□□□□□ -0.25
SPARC-206ENST00000524277 TBC1D22BQ9NU19 505 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 BRPF3Q9ULD4 1205 aa13.49□□□□□ -0.25
SPARC-206ENST00000524277 COL4A4P53420 1690 aaPredicted RBP13.49□□□□□ -0.25
SPARC-206ENST00000524277 DOCK5Q9H7D0 1870 aa13.48□□□□□ -0.25
SPARC-206ENST00000524277 COL1A2P08123 1366 aa13.48□□□□□ -0.25
SPARC-206ENST00000524277 DGKIO75912 1065 aa13.48□□□□□ -0.25
SPARC-206ENST00000524277 ARP10275 920 aa13.48□□□□□ -0.25
SPARC-206ENST00000524277 GNA11P29992 359 aa13.48□□□□□ -0.25
SPARC-206ENST00000524277 CTNNB1P35222 781 aa13.48□□□□□ -0.25
SPARC-206ENST00000524277 SETQ01105 290 aaPredicted RBP13.48□□□□□ -0.25
SPARC-206ENST00000524277 BTG3Q14201 252 aaPredicted RBP13.48□□□□□ -0.25
SPARC-206ENST00000524277 COL19A1Q14993 1142 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms