RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 AAMPQ13685 434 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 LPIN1Q14693 890 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 PCNX4Q63HM2 1172 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 SEPT1Q8WYJ6 367 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 CUL5Q93034 780 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 PBXIP1Q96AQ6 731 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 ERAP1Q9NZ08 941 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 RTEL1Q9NZ71 1219 aa13.31□□□□□ -0.28
CCNC-218ENST00000524049 MBLAC1A4D2B0 266 aaPredicted RBP13.3□□□□□ -0.28
CCNC-218ENST00000524049 RRN3P2A6NIE6 340 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 LOC730098B7Z3J9 87 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 ZXDAP98168 799 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 PPFIA1Q13136 1202 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 CBX2Q14781 532 aaPredicted RBP13.3□□□□□ -0.28
CCNC-218ENST00000524049 FBXO47Q5MNV8 452 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 IER5Q5VY09 327 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 NPAS4Q8IUM7 802 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 SMARCC2Q8TAQ2 1214 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 SPPL3Q8TCT6 385 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 SNX27Q96L92 541 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 SMARCAD1Q9H4L7 1026 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 ALG13Q9NP73 1137 aaKnown RBP13.3□□□□□ -0.28
CCNC-218ENST00000524049 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
CCNC-218ENST00000524049 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 LINC01565O15544 149 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 CYTH3O43739 400 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 GTF2F1P35269 517 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCNC-218ENST00000524049 TCF7P36402 384 aaPredicted RBP13.29□□□□□ -0.28
CCNC-218ENST00000524049 CAMK1Q14012 370 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
CCNC-218ENST00000524049 GRIK4Q16099 956 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 SMRP1Q8NCR6 262 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 PRSS33Q8NF86 280 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 DNAJB3Q8WWF6 145 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 GPRASP2Q96D09 838 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 PHF7Q9BWX1 381 aaPredicted RBP13.29□□□□□ -0.28
CCNC-218ENST00000524049 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
CCNC-218ENST00000524049 PLSCR2Q9NRY7 297 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 CLEC1BQ9P126 229 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 CDY2AQ9Y6F7 541 aa13.29□□□□□ -0.28
CCNC-218ENST00000524049 M0QZ92 97 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 IFIT3O14879 490 aaKnown RBP13.28□□□□□ -0.28
CCNC-218ENST00000524049 MAFGO15525 162 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 ITGB1P05556 798 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 ATF7P17544 494 aaPredicted RBP13.28□□□□□ -0.28
CCNC-218ENST00000524049 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
CCNC-218ENST00000524049 MRPS6P82932 125 aaKnown RBP13.28□□□□□ -0.28
CCNC-218ENST00000524049 SP4Q02446 784 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 UBE3AQ05086 875 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 SIGLEC14Q08ET2 396 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 TROAPQ12815 778 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 WTAPQ15007 396 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 SLC35G1Q2M3R5 365 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 PLEKHM2Q8IWE5 1019 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 SMC5Q8IY18 1101 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 FBXL6Q8N531 539 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 KLHL23Q8NBE8 558 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 POF1BQ8WVV4 589 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 GLG1Q92896 1179 aa13.28□□□□□ -0.28
CCNC-218ENST00000524049 CDCA3Q99618 268 aaPredicted RBP13.28□□□□□ -0.28
CCNC-218ENST00000524049 MRPL42Q9Y6G3 142 aaKnown RBP13.28□□□□□ -0.28
CCNC-218ENST00000524049 RALGAPA2Q2PPJ7 1873 aa13.27□□□□□ -0.28
CCNC-218ENST00000524049 MYH7BA7E2Y1 1941 aa13.27□□□□□ -0.28
CCNC-218ENST00000524049 RBAK-RBAKDNI3L0D1 243 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 NUBP1P53384 320 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 MARCH8Q5T0T0 291 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 PDE12Q6L8Q7 609 aaKnown RBP13.27□□□□□ -0.29
CCNC-218ENST00000524049 CATIPQ7Z7H3 387 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 CRIPAKQ8N1N5 446 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 NME8Q8N427 588 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 MAP3K14Q99558 947 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 AGO3Q9H9G7 860 aaKnown RBP13.27□□□□□ -0.29
CCNC-218ENST00000524049 AAASQ9NRG9 546 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 LRFN2Q9ULH4 789 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 TRPV2Q9Y5S1 764 aa13.27□□□□□ -0.29
CCNC-218ENST00000524049 GSTTP1A0A1W2PQM5 241 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 MEIS2O14770 477 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 SCG2P13521 617 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 KCNA2P16389 499 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 DNAJB1P25685 340 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 CD52P31358 61 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 TIE1P35590 1138 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 NRIP1P48552 1158 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 IER5LQ5T953 404 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 ZNF318Q5VUA4 2279 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 USP17L6PQ6QN14 398 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 RTN4RL1Q86UN2 441 aaPredicted RBP13.26□□□□□ -0.29
CCNC-218ENST00000524049 RRP36Q96EU6 259 aaKnown RBP13.26□□□□□ -0.29
CCNC-218ENST00000524049 LZTS2Q9BRK4 669 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 SPZ1Q9BXG8 430 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 TLE6Q9H808 572 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 SCUBE2Q9NQ36 999 aa13.26□□□□□ -0.29
CCNC-218ENST00000524049 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms