RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 CEP295Q9C0D2 2601 aa11.52□□□□□ -0.57
NDRG1-228ENST00000523931 C2CD4DB7Z1M9 353 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 TREHO43280 583 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 PI15O43692 258 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 PPFIA4O75335 1185 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 DGKIO75912 1065 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 ASGR2P07307 311 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 PCP11498 1178 aaKnown RBP11.51□□□□□ -0.57
NDRG1-228ENST00000523931 STXBP2Q15833 593 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 IMMTQ16891 758 aaKnown RBP11.51□□□□□ -0.57
NDRG1-228ENST00000523931 PAN2Q504Q3 1202 aaKnown RBP11.51□□□□□ -0.57
NDRG1-228ENST00000523931 KIAA0319Q5VV43 1072 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 ANKRD54Q6NXT1 300 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 MFSD6Q6ZSS7 791 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 CMTR2Q8IYT2 770 aaKnown RBP11.51□□□□□ -0.57
NDRG1-228ENST00000523931 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 DCAF4Q8WV16 495 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 RTP3Q9BQQ7 232 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 ESYT1Q9BSJ8 1104 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 RNF41Q9H4P4 317 aaPredicted RBP11.51□□□□□ -0.57
NDRG1-228ENST00000523931 TOMM22Q9NS69 142 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.51□□□□□ -0.57
NDRG1-228ENST00000523931 PLXNA4Q9HCM2 1894 aa11.51□□□□□ -0.57
NDRG1-228ENST00000523931 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
NDRG1-228ENST00000523931 TSPY2A6NKD2 308 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 ENPP3O14638 875 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 ORC4O43929 436 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 SORBS3O60504 671 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 RANBP6O60518 1105 aaKnown RBP11.5□□□□□ -0.57
NDRG1-228ENST00000523931 FGRP09769 529 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 SMIM10L2AP0DMW4 78 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 SMIM10L2BP0DMW5 78 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 GHRP10912 638 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 HOXD8P13378 290 aaPredicted RBP11.5□□□□□ -0.57
NDRG1-228ENST00000523931 SDHBP21912 280 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 PTH1RQ03431 593 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 ACAP1Q15027 740 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 RRP12Q5JTH9 1297 aaKnown RBP11.5□□□□□ -0.57
NDRG1-228ENST00000523931 SYCE2Q6PIF2 218 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 ZC3H14Q6PJT7 736 aaKnown RBP11.5□□□□□ -0.57
NDRG1-228ENST00000523931 NSUN6Q8TEA1 469 aaKnown RBP11.5□□□□□ -0.57
NDRG1-228ENST00000523931 COL26A1Q96A83 441 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 SPATA33Q96N06 139 aa11.5□□□□□ -0.57
NDRG1-228ENST00000523931 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
NDRG1-228ENST00000523931 HOXB8P17481 243 aaPredicted RBP11.49□□□□□ -0.57
NDRG1-228ENST00000523931 HOXC8P31273 242 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 LLGL2Q6P1M3 1020 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 BTNL9Q6UXG8 535 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 TMEM184AQ6ZMB5 413 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 TBC1D10CQ8IV04 446 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 TDRD5Q8NAT2 981 aaKnown RBP11.49□□□□□ -0.57
NDRG1-228ENST00000523931 NECTIN4Q96NY8 510 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 GPCPD1Q9NPB8 672 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 LIMD1Q9UGP4 676 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 CDH22Q9UJ99 828 aa11.49□□□□□ -0.57
NDRG1-228ENST00000523931 FRMPD2Q68DX3 1309 aaPredicted RBP11.49□□□□□ -0.57
NDRG1-228ENST00000523931 H3BRB1 525 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 NMT2O60551 498 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 ARP10275 920 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 GNAT1P11488 350 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 NPR3P17342 541 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 NT5C2P49902 561 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 ATXN1P54253 815 aaKnown RBP11.48□□□□□ -0.57
NDRG1-228ENST00000523931 UBE3AQ05086 875 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 USH1GQ495M9 461 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 FAM26DQ5JW98 314 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 CES5AQ6NT32 575 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 RIN2Q8WYP3 895 aaPredicted RBP11.48□□□□□ -0.57
NDRG1-228ENST00000523931 ESR2Q92731 530 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 MAP4K1Q92918 833 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 TAAR1Q96RJ0 339 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 IWS1Q96ST2 819 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 RMDN3Q96TC7 470 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 C16orf70Q9BSU1 422 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 RNPEPQ9H4A4 650 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 POMKQ9H5K3 350 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 TUT1Q9H6E5 874 aaKnown RBP11.48□□□□□ -0.57
NDRG1-228ENST00000523931 ANO2Q9NQ90 1003 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 FBXL21Q9UKT6 434 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
NDRG1-228ENST00000523931 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
NDRG1-228ENST00000523931 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
NDRG1-228ENST00000523931 EIF3JO75822 258 aaKnown RBP11.47□□□□□ -0.57
NDRG1-228ENST00000523931 CHRNA1P02708 482 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 EIF2AK2P19525 551 aaKnown RBP11.47□□□□□ -0.57
NDRG1-228ENST00000523931 RFX1P22670 979 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 LPIN1Q14693 890 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 HSDL1Q3SXM5 330 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 SPOUT1Q5T280 376 aaKnown RBP11.47□□□□□ -0.57
NDRG1-228ENST00000523931 MYSM1Q5VVJ2 828 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 PDE12Q6L8Q7 609 aaKnown RBP11.47□□□□□ -0.57
NDRG1-228ENST00000523931 SIX5Q8N196 739 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 RGS22Q8NE09 1264 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 KRT23Q9C075 422 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 LSG1Q9H089 658 aaKnown RBP11.47□□□□□ -0.57
NDRG1-228ENST00000523931 CNNM2Q9H8M5 875 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 ERVK-5Q9HDB9 667 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 SETD4Q9NVD3 440 aa11.47□□□□□ -0.57
NDRG1-228ENST00000523931 PCDHB12Q9Y5F1 795 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms