RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 NAF1Q96HR8 494 aaKnown RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 SUDS3Q9H7L9 328 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-213ENST00000523488 RXFP1Q9HBX9 757 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 FAM114A2Q9NRY5 505 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 AGPAT5Q9NUQ2 364 aa9.16□□□□□ -0.94
CSMD1-213ENST00000523488 TPBGLP0DKB5 382 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 GNAT1P11488 350 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 RXRAP19793 462 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 PHEXP78562 749 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 KLRC3Q07444 240 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 TAF11Q15544 211 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 RC3H1Q5TC82 1133 aaKnown RBP9.15□□□□□ -0.94
CSMD1-213ENST00000523488 NFRKBQ6P4R8 1299 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 ARHGAP22Q7Z5H3 698 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 LMNTD2Q8IXW0 634 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 CCDC42Q96M95 316 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 AGAP3Q96P47 875 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 C7orf25Q9BPX7 421 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 TRIM4Q9C037 500 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 DMAP1Q9NPF5 467 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-213ENST00000523488 INTUQ9ULD6 942 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 ESYT3A0FGR9 886 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 HEXIM1O94992 359 aaKnown RBP9.15□□□□□ -0.94
CSMD1-213ENST00000523488 RPN1P04843 607 aaKnown RBP9.15□□□□□ -0.94
CSMD1-213ENST00000523488 CSF1RP07333 972 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 GRM2Q14416 872 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 GSTA3Q16772 222 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 B4GALNT2Q8NHY0 566 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 LRRC15Q8TF66 581 aa9.15□□□□□ -0.94
CSMD1-213ENST00000523488 ARID2Q68CP9 1835 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 RAD51CO43502 376 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 SP100P23497 879 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-213ENST00000523488 RPL13P26373 211 aaKnown RBP9.15□□□□□ -0.95
CSMD1-213ENST00000523488 TMOD1P28289 359 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 GUCY1A2P33402 732 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 TUBP50607 506 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 LACTBP83111 547 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-213ENST00000523488 CYP27A1Q02318 531 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 NEXNQ0ZGT2 675 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 MKRN3Q13064 507 aaKnown RBP9.15□□□□□ -0.95
CSMD1-213ENST00000523488 ORC2Q13416 577 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-213ENST00000523488 ZCWPW2Q504Y3 356 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 FAM133BQ5BKY9 247 aaKnown RBP9.15□□□□□ -0.95
CSMD1-213ENST00000523488 DUPD1Q68J44 220 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 PDXDC1Q6P996 788 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-213ENST00000523488 MICU3Q86XE3 530 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 RELL1Q8IUW5 271 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 DIS3L2Q8IYB7 885 aaKnown RBP9.15□□□□□ -0.95
CSMD1-213ENST00000523488 C7orf43Q8WVR3 580 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 SLCO2A1Q92959 643 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 PHKBQ93100 1093 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 SLC35B4Q969S0 331 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 UBAC1Q9BSL1 405 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 OSBPL1AQ9BXW6 950 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 RNPEPL1Q9HAU8 725 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 SAMD15Q9P1V8 674 aa9.15□□□□□ -0.95
CSMD1-213ENST00000523488 AGTP01019 485 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 CTCFP49711 727 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-213ENST00000523488 USP11P51784 963 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 COPS2P61201 443 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 TRIM28Q13263 835 aaKnown RBP9.14□□□□□ -0.95
CSMD1-213ENST00000523488 ZNF333Q96JL9 665 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 SYT15Q9BQS2 421 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 SYT11Q9BT88 431 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 LRRC4CQ9HCJ2 640 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 LRWD1Q9UFC0 647 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 DIS3Q9Y2L1 958 aaKnown RBP9.14□□□□□ -0.95
CSMD1-213ENST00000523488 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 NCANO14594 1321 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 SPATA31A1Q5TZJ5 1347 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 BTBD11A6QL63 1104 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 PHF20L1A8MW92 1017 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 BTBD18B2RXH4 712 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 CSDE1O75534 798 aaKnown RBP9.14□□□□□ -0.95
CSMD1-213ENST00000523488 NOL4O94818 638 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 MYBL1P10243 752 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 KIF11P52732 1056 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 DEUP1Q05D60 604 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 HNRNPDQ14103 355 aaKnown RBP9.14□□□□□ -0.95
CSMD1-213ENST00000523488 MYBPC3Q14896 1274 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 CLEC16AQ2KHT3 1053 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 EARS2Q5JPH6 523 aaKnown RBP9.14□□□□□ -0.95
CSMD1-213ENST00000523488 TRIM74Q86UV6 250 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 TRIM73Q86UV7 250 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 CYP39A1Q9NYL5 469 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 STK38LQ9Y2H1 464 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 ATP9BO43861 1147 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 AKR1B10O60218 316 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 EVI5O60447 810 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 CALB2P22676 271 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 CTNNA1P35221 906 aaKnown RBP9.14□□□□□ -0.95
CSMD1-213ENST00000523488 ATP11AP98196 1134 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 QSER1Q2KHR3 1735 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 PPP1R15BQ5SWA1 713 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 RIC3Q7Z5B4 369 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 UBLCP1Q8WVY7 318 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-213ENST00000523488 STAMQ92783 540 aa9.14□□□□□ -0.95
CSMD1-213ENST00000523488 POLR3CQ9BUI4 534 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms