RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 EIF2AK1Q9BQI3 630 aaKnown RBP14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 LXNQ9BS40 222 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 FAM204AQ9H8W3 233 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 NR3C1P04150 777 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 ANGEL2Q5VTE6 544 aaKnown RBP14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 TSNARE1Q96NA8 513 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 FTCDO95954 541 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 LMNB1P20700 586 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 JAK3P52333 1124 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 FMR1Q06787 632 aaKnown RBP eCLIP14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 DDR1Q08345 913 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 SEC23AQ15436 765 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 HACE1Q8IYU2 909 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 DPH5Q9H2P9 285 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 RABEP2Q9H5N1 569 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 VCPKMTQ9H867 229 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 FBXO40Q9UH90 709 aa14.24□□□□□ -0.13
PCDHGB1-201ENST00000523390 KIF1AQ12756 1690 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 SLC16A4O15374 487 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 QARSP47897 775 aaKnown RBP14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 SNX16P57768 344 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 ST3GAL1Q11201 340 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 GUF1Q8N442 669 aaKnown RBP14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 NXF1Q9UBU9 619 aaKnown RBP14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 MAD2L2Q9UI95 211 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 PDS5AQ29RF7 1337 aaKnown RBP14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 MOCS3O95396 460 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 KRT76Q01546 638 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 ZMYND12Q9H0C1 365 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 GABBR1Q9UBS5 961 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 ATP2A2P16615 1042 aaKnown RBP14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 SRGAP1Q7Z6B7 1085 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 CPLX4Q7Z7G2 160 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 CCDC63Q8NA47 563 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 TXNDC16Q9P2K2 825 aa14.23□□□□□ -0.13
PCDHGB1-201ENST00000523390 E7EVH7 732 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 POLRMTO00411 1230 aaKnown RBP14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 GAS8O95995 478 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 P4HBP07237 508 aaKnown RBP14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 ATF7P17544 494 aaPredicted RBP14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 SCYL2Q6P3W7 929 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 TOGARAM2Q6ZUX3 1019 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 CCDC170Q8IYT3 715 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 ZNF653Q96CK0 615 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 GGA3Q9NZ52 723 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 SWSAP1Q6NVH7 229 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 ZNF710Q8N1W2 664 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 ACAD9Q9H845 621 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 GOLGA6CA6NDK9 693 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 GOLGA6DP0CG33 693 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 BRD3Q15059 726 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 GOLGA6AQ9NYA3 693 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 HESX1Q9UBX0 185 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 PNMA3Q9UL41 463 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 ZMYND10O75800 440 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 KCNH2Q12809 1159 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 AFAP1L1Q8TED9 768 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 FAM49AQ9H0Q0 323 aaPredicted RBP14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 AP5M1Q9H0R1 490 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 MYOZ2Q9NPC6 264 aa14.22□□□□□ -0.13
PCDHGB1-201ENST00000523390 NPHP3-ACAD11A0A0J9YXS1 232 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 MYO1FO00160 1098 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 BPIFB4P59827 614 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 IRX5P78411 483 aaPredicted RBP14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 PDIA5Q14554 519 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 NTRK3Q16288 839 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 KNOP1Q1ED39 458 aaKnown RBP14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 PHLDB2Q86SQ0 1253 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 THNSL1Q8IYQ7 743 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 ENGASEQ8NFI3 743 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 ACER1Q8TDN7 264 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 ZNF668Q96K58 619 aaPredicted RBP14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 MAP3K14Q99558 947 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 BEGAINQ9BUH8 593 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 AGXT2Q9BYV1 514 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 ABHD10Q9NUJ1 306 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 TTC26A0AVF1 554 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 VGLL3A8MV65 326 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 SERPING1P05155 500 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 OAS2P29728 719 aaKnown RBP14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 GCLMP48507 274 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 BAATQ14032 418 aaPredicted RBP14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 ALKBH5Q6P6C2 394 aaKnown RBP14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 PROM2Q8N271 834 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 NSRP1Q9H0G5 558 aaKnown RBP14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 DEFB129Q9H1M3 183 aa14.21□□□□□ -0.13
PCDHGB1-201ENST00000523390 CD58P19256 250 aa14.21□□□□□ -0.14
PCDHGB1-201ENST00000523390 HDLBPQ00341 1268 aaKnown RBP14.21□□□□□ -0.14
PCDHGB1-201ENST00000523390 ANKRD40Q6AI12 368 aa14.21□□□□□ -0.14
PCDHGB1-201ENST00000523390 PPP1R21Q6ZMI0 780 aa14.21□□□□□ -0.14
PCDHGB1-201ENST00000523390 MCPH1Q8NEM0 835 aa14.21□□□□□ -0.14
PCDHGB1-201ENST00000523390 PCDHA13Q9Y5I0 950 aa14.21□□□□□ -0.14
PCDHGB1-201ENST00000523390 PALM3A6NDB9 673 aaPredicted RBP14.2□□□□□ -0.14
PCDHGB1-201ENST00000523390 SMIM22K7EJ46 135 aa14.2□□□□□ -0.14
PCDHGB1-201ENST00000523390 THAP12O43422 761 aa14.2□□□□□ -0.14
PCDHGB1-201ENST00000523390 STK4Q13043 487 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms