RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 CACNA1FO60840 1977 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 PTPRFP10586 1907 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 A0A0A0MRY4 1105 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 LINC01553A4QN01 128 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 PROB1E7EW31 1015 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 WDR46O15213 610 aaKnown RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 HYAL3O43820 417 aaPredicted RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 EFCAB14O75071 495 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 ZBED4O75132 1171 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 LGR5O75473 907 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 GJB5O95377 273 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 IQCF3P0C7M6 154 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 UQCRFS1P1P0C7P4 283 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 UBTFL1P0CB47 393 aaPredicted RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 CYP7A1P22680 504 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 CPT1AP50416 773 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 WDR5P61964 334 aaKnown RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 HNRNPUQ00839 825 aaKnown RBP eCLIP4.57□□□□□ -1.685e-6■□□□□ 8.3
NPM1-210ENST00000523339 ICA1Q05084 483 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 EXOSC9Q06265 439 aaKnown RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 DMWDQ09019 674 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 SMAD4Q13485 552 aaKnown RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 MBTPS1Q14703 1052 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 ACAP1Q15027 740 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 SMAD2Q15796 467 aaKnown RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 LRRFIP1Q32MZ4 808 aaKnown RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 PRRT3Q5FWE3 981 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 TTC39AQ5SRH9 613 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 TATDN1Q6P1N9 297 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 PI16Q6UXB8 463 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 ARMCX2Q7L311 632 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 EEPD1Q7L9B9 569 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 CERS3Q8IU89 383 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 AMOTL1Q8IY63 956 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 CCDC144CPQ8IYA2 1237 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 MYOCDQ8IZQ8 938 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 MIGA1Q8NAN2 632 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.57□□□□□ -1.68
NPM1-210ENST00000523339 NUDT8Q8WV74 236 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 RMDN1Q96DB5 314 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 KAZALD1Q96I82 304 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 SUSD3Q96L08 255 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 SAMD11Q96NU1 681 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 C17orf80Q9BSJ5 609 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 TEX13BQ9BXU2 312 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 PHACTR1Q9C0D0 580 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 UPF3AQ9H1J1 476 aaKnown RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 BRD7Q9NPI1 651 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 HOMER2Q9NSB8 354 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 HMG20BQ9P0W2 317 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 CD207Q9UJ71 328 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 REV3LO60673 3130 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 TRANK1O15050 2925 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 PTPRZ1P23471 2315 aaPredicted RBP4.57□□□□□ -1.68
NPM1-210ENST00000523339 CACNA1BQ00975 2339 aa4.57□□□□□ -1.68
NPM1-210ENST00000523339 A0A1B0GUL6 1792 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 FANCIQ9NVI1 1328 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 SCO2A0A1W2PP80 73 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 ASB14A6NK59 587 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 VWA5AO00534 786 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 MBTPS2O43462 519 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 VAMP4O75379 141 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 IDH1O75874 414 aaKnown RBP4.56□□□□□ -1.68
NPM1-210ENST00000523339 CTNNB1P35222 781 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 SOX11P35716 441 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 NBL1P41271 181 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 DEFB103AP81534 67 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 NRG1Q02297 640 aaPredicted RBP4.56□□□□□ -1.68
NPM1-210ENST00000523339 TYRO3Q06418 890 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 IKQ13123 557 aaPredicted RBP4.56□□□□□ -1.68
NPM1-210ENST00000523339 EPC2Q52LR7 807 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 CCDC158Q5M9N0 1113 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 CNKSR3Q6P9H4 555 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 MAMDC4Q6UXC1 1216 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 KIAA1211Q6ZU35 1233 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 TMEM179Q6ZVK1 233 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 ATG9AQ7Z3C6 839 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 WWC1Q8IX03 1113 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 DMRTC2Q8IXT2 367 aaPredicted RBP4.56□□□□□ -1.68
NPM1-210ENST00000523339 SLC43A3Q8NBI5 491 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 TPCN2Q8NHX9 752 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 RHPN1Q8TCX5 695 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 BHMTQ93088 406 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 UCN2Q96RP3 112 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 MTG1Q9BT17 334 aaPredicted RBP4.56□□□□□ -1.68
NPM1-210ENST00000523339 SSBP4Q9BWG4 385 aaPredicted RBP4.56□□□□□ -1.68
NPM1-210ENST00000523339 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 EHD4Q9H223 541 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 VCPKMTQ9H867 229 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 NEUROD4Q9HD90 331 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 ZFP64Q9NPA5 681 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 INCENPQ9NQS7 918 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 FBXO40Q9UH90 709 aa4.56□□□□□ -1.68
NPM1-210ENST00000523339 PKD1L2Q7Z442 2459 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 ZFHX4Q86UP3 3567 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.55□□□□□ -1.68
NPM1-210ENST00000523339 ABHD14A-ACY1A0A1B0GW23 586 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 A0A1W2PRG0 241 aa4.55□□□□□ -1.68
NPM1-210ENST00000523339 ZBTB42B2RXF5 422 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms