RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 EAPPQ56P03 285 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 FAM102BQ5T8I3 360 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 TOGARAM2Q6ZUX3 1019 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 NCAPG2Q86XI2 1143 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 FAM186BQ8IYM0 893 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC170Q8IYT3 715 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 CYP2W1Q8TAV3 490 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 RBM46Q8TBY0 533 aaKnown RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 SECISBP2LQ93073 1101 aaKnown RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 ATG4CQ96DT6 458 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 MXRA8Q9BRK3 442 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 TCHPQ9BT92 498 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 ZNF408Q9H9D4 720 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 PUF60Q9UHX1 559 aaKnown RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 PPP1R9AQ9ULJ8 1098 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 MYH1P12882 1939 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 COL24A1Q17RW2 1714 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 CYP3A7-CYP3A51PA0A087WV96 503 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 NPHP3-ACAD11A0A0J9YXS1 232 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 FAM86B1E9PN63 330 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 AFPP02771 609 aaKnown RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 GYPCP04921 128 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 FAM86B2P0C5J1 330 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 CYP3A7P24462 503 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 PSMC2P35998 433 aaKnown RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 JAK3P52333 1124 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 BACE1P56817 501 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 RPS6P62753 249 aaKnown RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 ELF2Q15723 593 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 PADI6Q6TGC4 694 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 KCNK18Q7Z418 384 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 SYT2Q8N9I0 419 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 BANK1Q8NDB2 785 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 ZKSCAN4Q969J2 545 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 REEP2Q9BRK0 252 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 ACAD9Q9H845 621 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 KCNMB3Q9NPA1 279 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 TYW1Q9NV66 732 aaKnown RBP4.28□□□□□ -1.72
HDAC2-215ENST00000523334 MYO1AQ9UBC5 1043 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 FBXO40Q9UH90 709 aa4.28□□□□□ -1.72
HDAC2-215ENST00000523334 LY75O60449 1722 aa4.28□□□□□ -1.73
HDAC2-215ENST00000523334 UBR3Q6ZT12 1888 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 PIK3CDO00329 1044 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 NR3C1P04150 777 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 VCAM1P19320 739 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 SFNP31947 248 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 MTF1Q14872 753 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 EDRF1Q3B7T1 1238 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 NYAP1Q6ZVC0 841 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 SLC35F6Q8N357 371 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 KIAA0895Q8NCT3 520 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CEP170P1Q96L14 293 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 RANBP17Q9H2T7 1088 aaKnown RBP4.27□□□□□ -1.73
HDAC2-215ENST00000523334 INTS13Q9NVM9 706 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CAPN11Q9UMQ6 739 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 TAF1LQ8IZX4 1826 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 TMCO5BA8MYB1 307 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 NOP56O00567 594 aaKnown RBP4.27□□□□□ -1.73
HDAC2-215ENST00000523334 NFIBO00712 420 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 PDXKO00764 312 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CYP3A4P08684 503 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 MCM3P25205 808 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CLK2P49760 499 aaKnown RBP4.27□□□□□ -1.73
HDAC2-215ENST00000523334 PMS1P54277 932 aaKnown RBP4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CHMP4BP1P59074 171 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 DMP1Q13316 513 aaPredicted RBP4.27□□□□□ -1.73
HDAC2-215ENST00000523334 ALCAMQ13740 583 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 ERCC6LQ2NKX8 1250 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 SIAH1Q8IUQ4 282 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CDAN1Q8IWY9 1227 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 SLC17A8Q8NDX2 589 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 ACCSQ96QU6 501 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 EDEM3Q9BZQ6 932 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 AZI2Q9H6S1 392 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 TMEM206Q9H813 350 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 ARFGAP3Q9NP61 516 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 KCNH7Q9NS40 1196 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CASZ1Q86V15 1759 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 DCAF8L1A6NGE4 600 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 H0YCG3 227 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 NFKBIEO00221 500 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 PLA2G6O60733 806 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 EIF3JO75822 258 aaKnown RBP4.27□□□□□ -1.73
HDAC2-215ENST00000523334 TUBBP07437 444 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 NR3C2P08235 984 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 POTEJP0CG39 1038 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 ARP10275 920 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 STAT1P42224 750 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 PSMC5P62195 406 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 MAP3K9P80192 1104 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CYP27A1Q02318 531 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 KCNH2Q12809 1159 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 TBX2Q13207 712 aaPredicted RBP4.27□□□□□ -1.73
HDAC2-215ENST00000523334 BMS1Q14692 1282 aaKnown RBP4.27□□□□□ -1.73
HDAC2-215ENST00000523334 MAP9Q49MG5 647 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 RAD9BQ6WBX8 426 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 SAMD3Q8N6K7 520 aa4.27□□□□□ -1.73
HDAC2-215ENST00000523334 CAPZA3Q96KX2 299 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms