RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 NAP1L2Q9ULW6 460 aaPredicted RBP17.67■□□□□ 0.42
MRPS28-209ENST00000522987 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.66■□□□□ 0.42
MRPS28-209ENST00000522987 H3BNC9 293 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 DDX39AO00148 427 aaKnown RBP17.66■□□□□ 0.42
MRPS28-209ENST00000522987 ARP10275 920 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 INSRRP14616 1297 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 CD52P31358 61 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 PTPROQ16827 1216 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 PTCRAQ6ISU1 281 aaPredicted RBP17.66■□□□□ 0.42
MRPS28-209ENST00000522987 SYNE3Q6ZMZ3 975 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 FIBCD1Q8N539 461 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 IL17RAQ96F46 866 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 CDHR1Q96JP9 859 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 MTA3Q9BTC8 594 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 LRFN3Q9BTN0 628 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 SMARCAD1Q9H4L7 1026 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 AGO3Q9H9G7 860 aaKnown RBP17.66■□□□□ 0.42
MRPS28-209ENST00000522987 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 TRPC6Q9Y210 931 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 COL4A6Q14031 1691 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 PLXNA4Q9HCM2 1894 aa17.66■□□□□ 0.42
MRPS28-209ENST00000522987 SSTR3P32745 418 aaPredicted RBP17.65■□□□□ 0.42
MRPS28-209ENST00000522987 CLUL1Q15846 466 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 ADCK5Q3MIX3 580 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 LEXMQ3ZCV2 418 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 FBXO47Q5MNV8 452 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 TAF2Q6P1X5 1199 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 RSPH3Q86UC2 560 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 SAMD11Q96NU1 681 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 MXRA8Q9BRK3 442 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 EHMT1Q9H9B1 1298 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 JPH1Q9HDC5 661 aaPredicted RBP17.65■□□□□ 0.42
MRPS28-209ENST00000522987 SLC9A2Q9UBY0 812 aa17.65■□□□□ 0.42
MRPS28-209ENST00000522987 ENPP3O14638 875 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 GRM6O15303 877 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 MRPS6P82932 125 aaKnown RBP17.64■□□□□ 0.41
MRPS28-209ENST00000522987 RTN1Q16799 776 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 PAN2Q504Q3 1202 aaKnown RBP17.64■□□□□ 0.41
MRPS28-209ENST00000522987 TIGD5Q53EQ6 642 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 LINC01599Q8WXQ3 324 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 NEK1Q96PY6 1258 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 ANO3Q9BYT9 981 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 KCNH7Q9NS40 1196 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 CLDND1Q9NY35 253 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 V9GY48 417 aaPredicted RBP17.64■□□□□ 0.41
MRPS28-209ENST00000522987 FNDC1Q4ZHG4 1894 aaPredicted RBP17.64■□□□□ 0.41
MRPS28-209ENST00000522987 ADGRA3Q8IWK6 1321 aa17.64■□□□□ 0.41
MRPS28-209ENST00000522987 MBLAC1A4D2B0 266 aaPredicted RBP17.63■□□□□ 0.41
MRPS28-209ENST00000522987 GOLGA8AA7E2F4 631 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 GOLGA8BA8MQT2 603 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 CPA1P15085 419 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 ADCY7P51828 1080 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 ACTR2P61160 394 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 ITGB3BPQ13352 177 aaPredicted RBP17.63■□□□□ 0.41
MRPS28-209ENST00000522987 BTG3Q14201 252 aaPredicted RBP17.63■□□□□ 0.41
MRPS28-209ENST00000522987 PLCB4Q15147 1175 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 TMEM31Q5JXX7 168 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 FAM178BQ8IXR5 827 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 RASEFQ8IZ41 740 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 PPP1R16BQ96T49 567 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 SDF4Q9BRK5 362 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 AZI2Q9H6S1 392 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 C11orf16Q9NQ32 467 aa17.63■□□□□ 0.41
MRPS28-209ENST00000522987 KLF18A0A0U1RQI7 1052 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 STXBP3O00186 592 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 ZBTB43O43298 467 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 GTF2F1P35269 517 aaKnown RBP eCLIP17.62■□□□□ 0.41
MRPS28-209ENST00000522987 GATMP50440 423 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 TMEM266Q2M3C6 531 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 JAKMIP3Q5VZ66 844 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 TSHZ1Q6ZSZ6 1077 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 TRMT1LQ7Z2T5 733 aaKnown RBP17.62■□□□□ 0.41
MRPS28-209ENST00000522987 GJD3Q8N144 294 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 NSUN3Q9H649 340 aaKnown RBP17.62■□□□□ 0.41
MRPS28-209ENST00000522987 IGFLR1Q9H665 355 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 ALG13Q9NP73 1137 aaKnown RBP17.62■□□□□ 0.41
MRPS28-209ENST00000522987 RIC8AQ9NPQ8 531 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 GINS2Q9Y248 185 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 TRPV2Q9Y5S1 764 aa17.62■□□□□ 0.41
MRPS28-209ENST00000522987 SMCO2A6NFE2 343 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 ADAMTS3O15072 1205 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 PPFIA3O75145 1194 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 LINC00271P0C7V0 271 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 CDC27P30260 824 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 ZNF76P36508 570 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 BMPR1AP36894 532 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 EXOSC10Q01780 885 aaKnown RBP17.61■□□□□ 0.41
MRPS28-209ENST00000522987 FUT2Q10981 343 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 RNF20Q5VTR2 975 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 RPAINQ86UA6 219 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 RTN4RL1Q86UN2 441 aaPredicted RBP17.61■□□□□ 0.41
MRPS28-209ENST00000522987 FAM122AQ96E09 287 aa17.61■□□□□ 0.41
MRPS28-209ENST00000522987 AGO4Q9HCK5 861 aaKnown RBP17.61■□□□□ 0.41
MRPS28-209ENST00000522987 RBM28Q9NW13 759 aaKnown RBP17.61■□□□□ 0.41
MRPS28-209ENST00000522987 GRXCR2A6NFK2 248 aa17.6■□□□□ 0.41
MRPS28-209ENST00000522987 RRN3P2A6NIE6 340 aa17.6■□□□□ 0.41
MRPS28-209ENST00000522987 M0QZ92 97 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms