RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 PRDM12Q9H4Q4 367 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 BICC1Q9H694 974 aaKnown RBP8.26□□□□□ -1.09
SDCBP-210ENST00000522843 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-210ENST00000522843 SIPA1L1O43166 1804 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 UTYO14607 1347 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 SALL1Q9NSC2 1324 aa8.26□□□□□ -1.09
SDCBP-210ENST00000522843 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-210ENST00000522843 GRXCR1A8MXD5 290 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 LDHBP07195 334 aaKnown RBP8.25□□□□□ -1.09
SDCBP-210ENST00000522843 CYP2C19P33261 490 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 CAP2P40123 477 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 TLE2Q04725 743 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 PLCL1Q15111 1095 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 CCDC85BQ15834 202 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-210ENST00000522843 PEAR1Q5VY43 1037 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-210ENST00000522843 ANO1Q5XXA6 986 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 DYMQ7RTS9 669 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 STK11IPQ8N1F8 1099 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 SNX29Q8TEQ0 813 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 TIFAQ96CG3 184 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 EDC3Q96F86 508 aaKnown RBP8.25□□□□□ -1.09
SDCBP-210ENST00000522843 SNX27Q96L92 541 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 C1QTNF1Q9BXJ1 281 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 OSBPL5Q9H0X9 879 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-210ENST00000522843 C9orf78Q9NZ63 289 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-210ENST00000522843 PLXNA1Q9UIW2 1896 aa8.25□□□□□ -1.09
SDCBP-210ENST00000522843 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-210ENST00000522843 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-210ENST00000522843 DBX1A6NMT0 343 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 ALDH1L1O75891 902 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 CYP11A1P05108 521 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 IFIT1P09914 478 aaKnown RBP8.24□□□□□ -1.09
SDCBP-210ENST00000522843 CYBAP13498 195 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 MAOBP27338 520 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 CNGA1P29973 690 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 BTDP43251 543 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 RFX5P48382 616 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-210ENST00000522843 SERPINB4P48594 390 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 BACE1P56817 501 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 IRX3P78415 501 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-210ENST00000522843 ZNF792Q3KQV3 632 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 HP1BP3Q5SSJ5 553 aaPredicted RBP8.24□□□□□ -1.09
SDCBP-210ENST00000522843 FERMT2Q96AC1 680 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 PAGR1Q9BTK6 254 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 WDR18Q9BV38 432 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 ACSS3Q9H6R3 686 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.24□□□□□ -1.09
SDCBP-210ENST00000522843 ZFYVE1Q9HBF4 777 aa8.24□□□□□ -1.09
SDCBP-210ENST00000522843 METTL12A8MUP2 240 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 KIAA0355O15063 1070 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 MSCO60682 206 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 HOXC6P09630 235 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 ADCYAP1R1P41586 468 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 PHKA1P46020 1223 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 KCNQ1P51787 676 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 TFF2Q03403 129 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 EHHADHQ08426 723 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 ECM1Q16610 540 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 LCE4AQ5TA78 99 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 RASIP1Q5U651 963 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 MFSD14CQ5VZR4 134 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 OGFOD3Q6PK18 319 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 C16orf59Q7L2K0 433 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 ATG9AQ7Z3C6 839 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 LPIN2Q92539 896 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.23□□□□□ -1.09
SDCBP-210ENST00000522843 DNAJC18Q9H819 358 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 LATS2Q9NRM7 1088 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 C1GALT1Q9NS00 363 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 RAD18Q9NS91 495 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 FAM105AQ9NUU6 356 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-210ENST00000522843 FANCIQ9NVI1 1328 aa8.23□□□□□ -1.09
SDCBP-210ENST00000522843 GPR75-ASB3A0A0A6YYF3 556 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 SLC15A5A6NIM6 579 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 EYA2O00167 538 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 ICMTO60725 284 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 CTSBP07858 339 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 SLC5A1P13866 664 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 USP5P45974 858 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 GRB14Q14449 540 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 POU4F3Q15319 338 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 LRRC41Q15345 812 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 ZNF124Q15973 351 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 FBLN7Q53RD9 439 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 SEZ6L2Q6UXD5 910 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 ZNF574Q6ZN55 896 aaPredicted RBP8.22□□□□□ -1.09
SDCBP-210ENST00000522843 SPRED2Q7Z698 418 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 WFDC3Q8IUB2 231 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 KRTAP4-2Q9BYR5 136 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 SRCIN1Q9C0H9 1055 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 MROH7-TTC4A0A0A0MT08 1334 aa8.22□□□□□ -1.09
SDCBP-210ENST00000522843 FAM86C2PA6NEL3 165 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 KBTBD13C9JR72 458 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 CLTBP09497 229 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 PDIA4P13667 645 aaKnown RBP8.21□□□□□ -1.1
SDCBP-210ENST00000522843 ADORA1P30542 326 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 ASPAP45381 313 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 ATP2B2Q01814 1243 aa8.21□□□□□ -1.1
SDCBP-210ENST00000522843 FPGSQ05932 587 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms