RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 C11orf84Q9BUA3 381 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 PSTPIP2Q9H939 334 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 TUBE1Q9UJT0 475 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 RBM8AQ9Y5S9 174 aaKnown RBP17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 UBIAD1Q9Y5Z9 338 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 CDY2AQ9Y6F7 541 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 ATG2AQ2TAZ0 1938 aa17.56■□□□□ 0.4
TRAPPC9-213ENST00000522504 LINC01565O15544 149 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 PRC1O43663 620 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 SMARCA1P28370 1054 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 CD52P31358 61 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 IRS1P35568 1242 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 IGBP1P78318 339 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 RAB11FIP4Q86YS3 637 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 ADHFE1Q8IWW8 467 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 GIMAP8Q8ND71 665 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 ALG13Q9NP73 1137 aaKnown RBP17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 ERAP1Q9NZ08 941 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 PRKAG3Q9UGI9 489 aa17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
TRAPPC9-213ENST00000522504 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 TBX10O75333 385 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 DGKIO75912 1065 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 DNAJB1P25685 340 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 KIF5BP33176 963 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 BTG3Q14201 252 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 TSHZ1Q6ZSZ6 1077 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 GLG1Q92896 1179 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 FAM49AQ9H0Q0 323 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 LMAN2LQ9H0V9 348 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 IGFLR1Q9H665 355 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 MRPL42Q9Y6G3 142 aaKnown RBP17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 RALGAPA2Q2PPJ7 1873 aa17.54■□□□□ 0.4
TRAPPC9-213ENST00000522504 MBTPS2O43462 519 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 INSRRP14616 1297 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 MRPS6P82932 125 aaKnown RBP17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 TMEM62Q0P6H9 643 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 MTMR1Q13613 665 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 SMAD2Q15796 467 aaKnown RBP17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 RSPH3Q86UC2 560 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 ALYREFQ86V81 257 aaKnown RBP17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 CYP2W1Q8TAV3 490 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 TRAPPC12Q8WVT3 735 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 CDHR1Q96JP9 859 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 LZTS2Q9BRK4 669 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 SMARCAD1Q9H4L7 1026 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 JADE2Q9NQC1 790 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 PLAGL2Q9UPG8 496 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 TTC3P53804 2025 aa17.53■□□□□ 0.4
TRAPPC9-213ENST00000522504 USP34Q70CQ2 3546 aa17.52■□□□□ 0.4
TRAPPC9-213ENST00000522504 NCK2O43639 380 aa17.52■□□□□ 0.4
TRAPPC9-213ENST00000522504 MMP1P03956 469 aa17.52■□□□□ 0.4
TRAPPC9-213ENST00000522504 GATMP50440 423 aa17.52■□□□□ 0.4
TRAPPC9-213ENST00000522504 PCDHA6Q9UN73 950 aa17.52■□□□□ 0.4
TRAPPC9-213ENST00000522504 FAM50BQ9Y247 325 aa17.52■□□□□ 0.4
TRAPPC9-213ENST00000522504 RWDD3Q9Y3V2 267 aa17.52■□□□□ 0.4
TRAPPC9-213ENST00000522504 PCDHA8Q9Y5H6 950 aa17.52■□□□□ 0.4
TRAPPC9-213ENST00000522504 ITGB1P05556 798 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 GNAQP50148 359 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 ADAM15Q13444 863 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 CSPP1Q1MSJ5 1256 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 CASC1Q6TDU7 716 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 HFE2Q6ZVN8 426 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 ADGRD2Q7Z7M1 963 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 PLVAPQ9BX97 442 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 LRRC2Q9BYS8 371 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 TMX1Q9H3N1 280 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 MUTYHQ9UIF7 546 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 PADI3Q9ULW8 664 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 PCDHGC5Q9Y5F6 944 aa17.51■□□□□ 0.39
TRAPPC9-213ENST00000522504 SMAD4Q13485 552 aaKnown RBP17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 PLCB4Q15147 1175 aa17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 PAN2Q504Q3 1202 aaKnown RBP17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 TYW1BQ6NUM6 668 aa17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 TMTC3Q6ZXV5 915 aa17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 SPPL3Q8TCT6 385 aa17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 MSLNLQ96KJ4 702 aa17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 FBXL18Q96ME1 805 aa17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 LSG1Q9H089 658 aaKnown RBP17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 KCNH7Q9NS40 1196 aa17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 KAT6AQ92794 2004 aa17.5■□□□□ 0.39
TRAPPC9-213ENST00000522504 CCDC69A6NI79 296 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 RRN3P2A6NIE6 340 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 SPDYE3A6NKU9 549 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 ARP10275 920 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 MCM5P33992 734 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 NHLH1Q02575 133 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 ITGB3BPQ13352 177 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 TMEM266Q2M3C6 531 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 IER5Q5VY09 327 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 HEATR3Q7Z4Q2 680 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 RNF135Q8IUD6 432 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 NPAS4Q8IUM7 802 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 CMTR2Q8IYT2 770 aaKnown RBP17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 KLHL23Q8NBE8 558 aa17.49■□□□□ 0.39
TRAPPC9-213ENST00000522504 PGBD1Q96JS3 809 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms