RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 UPP2O95045 317 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 FOSP01100 380 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 RB1P06400 928 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 KCNA5P22460 613 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 MARK3P27448 753 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 IRX6P78412 446 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 PUS10Q3MIT2 529 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 BMP2KLQ5H9B9 411 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 MARCH8Q5T0T0 291 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 WWC2Q6AWC2 1192 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 SYNE3Q6ZMZ3 975 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 TSHZ1Q6ZSZ6 1077 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 HEATR3Q7Z4Q2 680 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 FAM178BQ8IXR5 827 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 FIBCD1Q8N539 461 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 BANK1Q8NDB2 785 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 NEK9Q8TD19 979 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 GLG1Q92896 1179 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 CLP1Q92989 425 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 MXRA8Q9BRK3 442 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 LRRC2Q9BYS8 371 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 LMAN2LQ9H0V9 348 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 NSUN3Q9H649 340 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 RIC8AQ9NPQ8 531 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 SLC9A2Q9UBY0 812 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 ARIH1Q9Y4X5 557 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 SQORQ9Y6N5 450 aa10.18□□□□□ -0.78
CTNNA1-229ENST00000521683 NCK2O43639 380 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 GPR37L1O60883 481 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 LINC00271P0C7V0 271 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 CTNNB1P35222 781 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 BMPR1AP36894 532 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 PLA2G5P39877 138 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 RCAN1P53805 252 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 NAPAP54920 295 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 MRPS6P82932 125 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 FUT2Q10981 343 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 AP3B2Q13367 1082 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 TCEAL5Q5H9L2 206 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 TMEM31Q5JXX7 168 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 FAM43BQ6ZT52 329 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 PLPPR4Q7Z2D5 763 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 RAB11FIP4Q86YS3 637 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 CCDC82Q8N4S0 544 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 DNAJB3Q8WWF6 145 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 ZNF689Q96CS4 500 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 PABPC5Q96DU9 382 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 PCYT2Q99447 389 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 LRFN3Q9BTN0 628 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 C11orf84Q9BUA3 381 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 GLT8D2Q9H1C3 349 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 EPHX3Q9H6B9 360 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 AZI2Q9H6S1 392 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 KCNH7Q9NS40 1196 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 PKD2L1Q9P0L9 805 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 RAPGEFL1Q9UHV5 662 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 CDY2AQ9Y6F7 541 aa10.17□□□□□ -0.78
CTNNA1-229ENST00000521683 KDM3AQ9Y4C1 1321 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 GRXCR2A6NFK2 248 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 PI4K2BG5E9Z4 385 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 ENPP3O14638 875 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 ZBTB43O43298 467 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 INSRRP14616 1297 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 SREBF1P36956 1147 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 CLK2P49760 499 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 SLC26A2P50443 739 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 ADCY7P51828 1080 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 ACTR2P61160 394 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 EXOSC10Q01780 885 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 PLCB4Q15147 1175 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 RTN1Q16799 776 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 TSGA10IPQ3SY00 556 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 CEP55Q53EZ4 464 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 IER5Q5VY09 327 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 PTCRAQ6ISU1 281 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 TYW1BQ6NUM6 668 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 NIPA1Q7RTP0 329 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 GJD3Q8N144 294 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 KHSRPQ92945 711 aaKnown RBP eCLIP10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 NEK1Q96PY6 1258 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 SDF4Q9BRK5 362 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 PLVAPQ9BX97 442 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 FTHL17Q9BXU8 183 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 ANO3Q9BYT9 981 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 CD320Q9NPF0 282 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 BARHL2Q9NY43 387 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 FAM50BQ9Y247 325 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 TRPV2Q9Y5S1 764 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 MUC6Q6W4X9 2439 aa10.16□□□□□ -0.78
CTNNA1-229ENST00000521683 IGSF9BQ9UPX0 1349 aa10.15□□□□□ -0.78
CTNNA1-229ENST00000521683 IGKV6D-21A0A0A0MT36 114 aa10.15□□□□□ -0.78
CTNNA1-229ENST00000521683 SMIM35A0A1B0GVV1 85 aa10.15□□□□□ -0.78
CTNNA1-229ENST00000521683 M0QZ92 97 aa10.15□□□□□ -0.78
CTNNA1-229ENST00000521683 STXBP3O00186 592 aa10.15□□□□□ -0.78
CTNNA1-229ENST00000521683 MEIS1O00470 390 aa10.15□□□□□ -0.78
CTNNA1-229ENST00000521683 DGKIO75912 1065 aa10.15□□□□□ -0.78
CTNNA1-229ENST00000521683 ATG7O95352 703 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms