RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 COL4A3BPQ9Y5P4 624 aa20.46■□□□□ 0.87
TRAPPC9-210ENST00000521667 TTC26A0AVF1 554 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 GOLGA6L9A6NEM1 432 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 ATP2A1O14983 1001 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 GRIN3BO60391 1043 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 ITGB3BPQ13352 177 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 BAATQ14032 418 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 MTF1Q14872 753 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 TMEM132BQ14DG7 1078 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 SYCP1Q15431 976 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 ARHGEF16Q5VV41 709 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 RAD9BQ6WBX8 426 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 MIER3Q7Z3K6 550 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 TMTC1Q8IUR5 882 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 RETREG2Q8NC44 543 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 LXNQ9BS40 222 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 NDST4Q9H3R1 872 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 WRAP73Q9P2S5 460 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 CAPN11Q9UMQ6 739 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 MYPNQ86TC9 1320 aa20.45■□□□□ 0.86
TRAPPC9-210ENST00000521667 RSPH10B2B2RC85 870 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 RSPH10BP0C881 870 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 GAP43P17677 238 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 CASP5P51878 434 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 C1orf186Q6ZWK4 172 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 EPM2AIP1Q7L775 607 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 HOXC10Q9NYD6 342 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 LUC7L2Q9Y383 392 aaKnown RBP20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 RLFQ13129 1914 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 ZBTB39O15060 712 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 MYCLP12524 364 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 XRRA1Q6P2D8 792 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 TEX13BQ9BXU2 312 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 TBC1D22BQ9NU19 505 aa20.44■□□□□ 0.86
TRAPPC9-210ENST00000521667 GLTPD2A6NH11 291 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 PPP1R12BO60237 982 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 CCDC175P0C221 793 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 EPHX2P34913 555 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 EDRF1Q3B7T1 1238 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 CYP26C1Q6V0L0 522 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 ZC3H3Q8IXZ2 948 aaKnown RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 BANK1Q8NDB2 785 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 OR8K1Q8NGG5 319 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 PURBQ96QR8 312 aaKnown RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 DESI2Q9BSY9 194 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 TTYH3Q9C0H2 523 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 OLFML3Q9NRN5 406 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 KCND2Q9NZV8 630 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 SPDYE16A6NNV3 312 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 DYNC1I1O14576 645 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 GNA14O95837 355 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 TRIM21P19474 475 aaKnown RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 ETF1P62495 437 aaKnown RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 ERVK-24P63145 666 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 FIGNQ5HY92 759 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 SYT10Q6XYQ8 523 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 PCMTD1Q96MG8 357 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 DNAJC7Q99615 494 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 MRPL44Q9H9J2 332 aaKnown RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 CSADQ9Y600 493 aa20.43■□□□□ 0.86
TRAPPC9-210ENST00000521667 RASSF10A6NK89 507 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 FAM13AO94988 1023 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 P4HBP07237 508 aaKnown RBP20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 MYBP10242 640 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 KLK7P49862 253 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 KNOP1Q1ED39 458 aaKnown RBP20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 BMT2Q1RMZ1 405 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 CCDC40Q4G0X9 1142 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 IQCDQ96DY2 449 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 TRAF3IP3Q9Y228 551 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 ADGRG1Q9Y653 693 aa20.42■□□□□ 0.86
TRAPPC9-210ENST00000521667 CCND2P30279 289 aa20.41■□□□□ 0.86
TRAPPC9-210ENST00000521667 TRIM65Q6PJ69 517 aa20.41■□□□□ 0.86
TRAPPC9-210ENST00000521667 ZSWIM4Q9H7M6 989 aa20.41■□□□□ 0.86
TRAPPC9-210ENST00000521667 ACAD9Q9H845 621 aa20.41■□□□□ 0.86
TRAPPC9-210ENST00000521667 MARSP56192 900 aaKnown RBP20.41■□□□□ 0.86
TRAPPC9-210ENST00000521667 VSIG10LQ86VR7 867 aa20.41■□□□□ 0.86
TRAPPC9-210ENST00000521667 MAF1Q9H063 256 aa20.41■□□□□ 0.86
TRAPPC9-210ENST00000521667 POLD4Q9HCU8 107 aa20.41■□□□□ 0.86
TRAPPC9-210ENST00000521667 A0A1W2PQJ5 194 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 TESPA1A2RU30 521 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 ARHGEF35A5YM69 484 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 PRPF6O94906 941 aaKnown RBP20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 GCNT3O95395 438 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 HOXD13P35453 343 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 ADAM9Q13443 819 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 TSR1Q2NL82 804 aaKnown RBP20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 EAPPQ56P03 285 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 MYCT1Q8N699 235 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 BCAS3Q9H6U6 928 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 PARVGQ9HBI0 331 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 ODF2LQ9ULJ1 636 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 SIK3Q9Y2K2 1263 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 SAMM50Q9Y512 469 aa20.4■□□□□ 0.86
TRAPPC9-210ENST00000521667 SFI1A8K8P3 1242 aa20.39■□□□□ 0.86
TRAPPC9-210ENST00000521667 PDXKO00764 312 aa20.39■□□□□ 0.86
TRAPPC9-210ENST00000521667 CETN3O15182 167 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms