RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 ISM2Q6H9L7 571 aa24.71■■□□□ 1.55
PTP4A3-204ENST00000521578 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.71■■□□□ 1.551e-6■■■■□ 23.9
PTP4A3-204ENST00000521578 MAN1B1Q9UKM7 699 aa24.71■■□□□ 1.55
PTP4A3-204ENST00000521578 DOCK5Q9H7D0 1870 aa24.71■■□□□ 1.55
PTP4A3-204ENST00000521578 IPO5O00410 1097 aaKnown RBP24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 SLFN14P0C7P3 912 aa24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 KCNA2P16389 499 aa24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 MYL5Q02045 173 aa24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 SH3RF1Q7Z6J0 888 aa24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 C4orf32Q8N8J7 132 aa24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 SYMPKQ92797 1274 aaKnown RBP24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 EPSTI1Q96J88 318 aa24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 RNF208Q9H0X6 261 aa24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 TMEM60Q9H2L4 133 aa24.7■■□□□ 1.54
PTP4A3-204ENST00000521578 MARCH6O60337 910 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 BMP6P22004 513 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 ITGB3BPQ13352 177 aaPredicted RBP24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 MORC3Q14149 939 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 CALCRLQ16602 461 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 ETNPPLQ8TBG4 499 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 SMARCE1Q969G3 411 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 KCNMB3Q9NPA1 279 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 DDX20Q9UHI6 824 aaKnown RBP24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 A0A087X0B3 334 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 GGPS1O95749 300 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 PRR29P0C7W0 189 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 CYFIP1Q7L576 1253 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 PDILTQ8N807 584 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 MLKLQ8NB16 471 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 SENP7Q9BQF6 1050 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 HSD3B7Q9H2F3 369 aa24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 GNEQ9Y223 722 aaKnown RBP24.69■■□□□ 1.54
PTP4A3-204ENST00000521578 DDX39AO00148 427 aaKnown RBP24.68■■□□□ 1.54
PTP4A3-204ENST00000521578 LAD1O00515 517 aa24.68■■□□□ 1.54
PTP4A3-204ENST00000521578 RARBP10826 455 aa24.68■■□□□ 1.54
PTP4A3-204ENST00000521578 NEDD9Q14511 834 aa24.68■■□□□ 1.54
PTP4A3-204ENST00000521578 DHX37Q8IY37 1157 aaKnown RBP24.68■■□□□ 1.54
PTP4A3-204ENST00000521578 HAS1Q92839 578 aa24.68■■□□□ 1.54
PTP4A3-204ENST00000521578 PYM1Q9BRP8 204 aaKnown RBP24.68■■□□□ 1.54
PTP4A3-204ENST00000521578 DYNC1LI2O43237 492 aaPredicted RBP24.67■■□□□ 1.54
PTP4A3-204ENST00000521578 DUSP11O75319 330 aaKnown RBP24.67■■□□□ 1.54
PTP4A3-204ENST00000521578 SP4Q02446 784 aa24.67■■□□□ 1.54
PTP4A3-204ENST00000521578 CELF3Q5SZQ8 465 aaKnown RBP24.67■■□□□ 1.54
PTP4A3-204ENST00000521578 SLC5A5Q92911 643 aa24.67■■□□□ 1.54
PTP4A3-204ENST00000521578 MLXIPQ9HAP2 919 aa24.67■■□□□ 1.54
PTP4A3-204ENST00000521578 PAK6Q9NQU5 681 aaPredicted RBP24.67■■□□□ 1.54
PTP4A3-204ENST00000521578 IMPACTQ9P2X3 320 aa24.67■■□□□ 1.54
PTP4A3-204ENST00000521578 VWA3AA6NCI4 1184 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 NKRFO15226 690 aaKnown RBP eCLIP24.66■■□□□ 1.546e-7■■■□□ 15.3
PTP4A3-204ENST00000521578 SMC2O95347 1197 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 GH1P01241 217 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 ARHGAP1Q07960 439 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 IL17AQ16552 155 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 TLK2Q86UE8 772 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 OR6J1Q8NGC5 347 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 CACTINQ8WUQ7 758 aaKnown RBP24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 DHX58Q96C10 678 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 DEFB118Q96PH6 123 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 DACH1Q9UI36 760 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 DHX15O43143 795 aaKnown RBP24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 GAS7O60861 476 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 PGK1P00558 417 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 LONP1P36776 959 aaKnown RBP24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 IRX5P78411 483 aaPredicted RBP24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 CT47A1Q5JQC4 288 aaPredicted RBP24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 LRCH2Q5VUJ6 765 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 LHX8Q68G74 356 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 C17orf53Q8N3J3 647 aaPredicted RBP24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 GIMAP8Q8ND71 665 aaPredicted RBP24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 PAGE5Q96GU1 130 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 FAM20AQ96MK3 541 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 MTMR9Q96QG7 549 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 TELO2Q9Y4R8 837 aa24.66■■□□□ 1.54
PTP4A3-204ENST00000521578 POTEFA5A3E0 1075 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 TBX3O15119 743 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 MSCO60682 206 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 FARP2O94887 1054 aaPredicted RBP24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 OR52Z1P0C646 297 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 TXKP42681 527 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 LRMPQ12912 555 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 LRRC8AQ8IWT6 810 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 XPO4Q9C0E2 1151 aaKnown RBP24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 AP5M1Q9H0R1 490 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 JPH1Q9HDC5 661 aaPredicted RBP24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 XPNPEP3Q9NQH7 507 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 TBC1D22BQ9NU19 505 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 IFNKQ9P0W0 207 aa24.65■■□□□ 1.54
PTP4A3-204ENST00000521578 NFASCO94856 1347 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 SYNRGQ9UMZ2 1314 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 MYCNP04198 464 aaPredicted RBP24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 FANCCQ00597 558 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 E2F4Q16254 413 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 METTL7BQ6UX53 244 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 SLFN12Q8IYM2 578 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 GRAMD1CQ8IYS0 662 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 SPATA33Q96N06 139 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 RIT2Q99578 217 aa24.64■■□□□ 1.54
PTP4A3-204ENST00000521578 PSMD10O75832 226 aa24.64■■□□□ 1.53
PTP4A3-204ENST00000521578 GSDMDP57764 484 aa24.64■■□□□ 1.53
PTP4A3-204ENST00000521578 LAMC2Q13753 1193 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 245.3 ms