RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CPZQ66K79 652 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 CXorf57Q6NSI4 855 aaKnown RBP4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 CYP4F22Q6NT55 531 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 B3GNT9Q6UX72 402 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 KCNK18Q7Z418 384 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 ATG4DQ86TL0 474 aaPredicted RBP4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 TPH2Q8IWU9 490 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 RBM12BQ8IXT5 1001 aaKnown RBP4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 CCDC146Q8IYE0 955 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 LZTR1Q8N653 840 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 PANK1Q8TE04 598 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 CHAMP1Q96JM3 812 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 SCYL1Q96KG9 808 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 ANLNQ9NQW6 1124 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 PDLIM7Q9NR12 457 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZNF277Q9NRM2 450 aaPredicted RBP4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 IMPACTQ9P2X3 320 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 DSEQ9UL01 958 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 TMPRSS11EQ9UL52 423 aa4.62□□□□□ -1.67
HMGN1P28-201ENST00000521340 H7C1D1 291 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 SGSM2O43147 1006 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 DGKIO75912 1065 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 MT-CO1P00395 513 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 NTRK1P04629 796 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 MYBL2P10244 700 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 KRT15P19012 456 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 LSP1P33241 339 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 KIF11P52732 1056 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 MLC1Q15049 377 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 EPHA7Q15375 998 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 CCSAPQ6IQ19 270 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 ARHGAP27Q6ZUM4 889 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 HDGFL2Q7Z4V5 671 aaPredicted RBP4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 NLRX1Q86UT6 975 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 C11orf74Q86VG3 221 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 WDR75Q8IWA0 830 aaKnown RBP4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 PMM1Q92871 262 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 ALPK1Q96QP1 1244 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 SMOC1Q9H4F8 434 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 PRDM12Q9H4Q4 367 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 ACSS2Q9NR19 701 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 BTG4Q9NY30 223 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 ASH2LQ9UBL3 628 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 IP6K2Q9UHH9 426 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 TMEM59LQ9UK28 342 aa4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 NOB1Q9ULX3 412 aaKnown RBP4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 LUC7L2Q9Y383 392 aaKnown RBP4.61□□□□□ -1.67
HMGN1P28-201ENST00000521340 TCRBV5S2A0A599 114 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 BIN1O00499 593 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 PSPNO60542 156 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 BUB1BO60566 1050 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 HPXP02790 462 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 CYP17A1P05093 508 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 RECQLP46063 649 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 MTNR1BP49286 362 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 SCAND1P57086 179 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 RHBDL3P58872 404 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 ERVFC1P60507 584 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 TCIRG1Q13488 830 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 UBE4AQ14139 1066 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZNF124Q15973 351 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 KCTD1Q719H9 257 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 RTN4RL1Q86UN2 441 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 SLC41A1Q8IVJ1 513 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 ANKS4BQ8N8V4 417 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 FAM168AQ92567 244 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 JADE3Q92613 823 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 SLC12A5Q9H2X9 1139 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 KCNH7Q9NS40 1196 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 OBP2AQ9NY56 170 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 BTBD7Q9P203 1132 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZBTB21Q9ULJ3 1066 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 PNMA8BQ9ULN7 279 aaPredicted RBP4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 ANKRD6Q9Y2G4 727 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 RIPOR2Q9Y4F9 1068 aa4.6□□□□□ -1.67
HMGN1P28-201ENST00000521340 ELL2O00472 640 aaPredicted RBP4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 SCDO00767 359 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 HGSO14964 777 aaPredicted RBP4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 SLC27A2O14975 620 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 KRT37O76014 449 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 MPIG6BO95866 241 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 TMEM253P0C7T8 217 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 PTPN1P18031 435 aaKnown RBP4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 FNTBP49356 437 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 ZP2Q05996 745 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 TUSC3Q13454 348 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 HLTFQ14527 1009 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 STEAP3Q658P3 488 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 GALNT18Q6P9A2 607 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 CEP128Q6ZU80 1094 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 DGKHQ86XP1 1220 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 NLGN4XQ8N0W4 816 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 PDZD8Q8NEN9 1154 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 RTF1Q92541 710 aaKnown RBP4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 TNFRSF12AQ9NP84 129 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 LUC7LQ9NQ29 371 aaKnown RBP4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 PRDM7Q9NQW5 492 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 TOMM22Q9NS69 142 aa4.59□□□□□ -1.67
HMGN1P28-201ENST00000521340 CCM2LQ9NUG4 571 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms