RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 MBOAT7Q96N66 472 aa23.39■■□□□ 1.33
TRIM35-203ENST00000521253 BRMS1Q9HCU9 246 aa23.39■■□□□ 1.33
TRIM35-203ENST00000521253 BACH1O14867 736 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 MMP1P03956 469 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 THPOP40225 353 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 KRT76Q01546 638 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 TRIM29Q14134 588 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 GPNMBQ14956 572 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 GRIK4Q16099 956 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 LETM2Q2VYF4 491 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 ZNF618Q5T7W0 954 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 KRT40Q6A162 431 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 MIS18BP1Q6P0N0 1132 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 NEK8Q86SG6 692 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 CCDC60Q8IWA6 550 aaPredicted RBP23.38■■□□□ 1.33
TRIM35-203ENST00000521253 SLC5A5Q92911 643 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 TNFRSF25Q93038 417 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 GJA10Q969M2 543 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 RIT2Q99578 217 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 CXXC1Q9P0U4 656 aaPredicted RBP23.38■■□□□ 1.33
TRIM35-203ENST00000521253 TCEAL9Q9UHQ7 104 aa23.38■■□□□ 1.33
TRIM35-203ENST00000521253 FAM205CA6NFA0 338 aa23.37■■□□□ 1.33
TRIM35-203ENST00000521253 PLCB4Q15147 1175 aa23.37■■□□□ 1.33
TRIM35-203ENST00000521253 GPR153Q6NV75 609 aa23.37■■□□□ 1.33
TRIM35-203ENST00000521253 SMAP1Q8IYB5 467 aaPredicted RBP23.37■■□□□ 1.33
TRIM35-203ENST00000521253 BACH2Q9BYV9 841 aa23.37■■□□□ 1.33
TRIM35-203ENST00000521253 DDX25Q9UHL0 483 aaKnown RBP23.37■■□□□ 1.33
TRIM35-203ENST00000521253 TRPC6Q9Y210 931 aa23.37■■□□□ 1.33
TRIM35-203ENST00000521253 BTBD18B2RXH4 712 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 SLC37A4O43826 429 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 GAS7O60861 476 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 CD2BP2O95400 341 aaKnown RBP23.36■■□□□ 1.33
TRIM35-203ENST00000521253 INSRRP14616 1297 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 SLC26A2P50443 739 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 SMAD3P84022 425 aaKnown RBP23.36■■□□□ 1.33
TRIM35-203ENST00000521253 LRCH2Q5VUJ6 765 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 FAM160B1Q5W0V3 765 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 FAM109BQ6ICB4 259 aaPredicted RBP23.36■■□□□ 1.33
TRIM35-203ENST00000521253 SWSAP1Q6NVH7 229 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 DIS3L2Q8IYB7 885 aaKnown RBP23.36■■□□□ 1.33
TRIM35-203ENST00000521253 IL27Q8NEV9 243 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 ETNPPLQ8TBG4 499 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 FTOQ9C0B1 505 aaKnown RBP eCLIP23.36■■□□□ 1.33
TRIM35-203ENST00000521253 ZNF302Q9NR11 478 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 PCDHA10Q9Y5I2 948 aa23.36■■□□□ 1.33
TRIM35-203ENST00000521253 TRIP12Q14669 1992 aaPredicted RBP23.36■■□□□ 1.33
TRIM35-203ENST00000521253 TANC1Q9C0D5 1861 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 MBLAC1A4D2B0 266 aaPredicted RBP23.35■■□□□ 1.33
TRIM35-203ENST00000521253 NBNO60934 754 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 PARNO95453 639 aaKnown RBP23.35■■□□□ 1.33
TRIM35-203ENST00000521253 IGBP1P78318 339 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 HMGN5P82970 282 aaKnown RBP23.35■■□□□ 1.33
TRIM35-203ENST00000521253 GUCY1B3Q02153 619 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 MBTPS1Q14703 1052 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 MARCH8Q5T0T0 291 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 PPP4R3AQ6IN85 833 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 RUFY4Q6ZNE9 571 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 TEKT3Q9BXF9 490 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 MTIF3Q9H2K0 278 aaKnown RBP23.35■■□□□ 1.33
TRIM35-203ENST00000521253 TUBE1Q9UJT0 475 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 SAMM50Q9Y512 469 aa23.35■■□□□ 1.33
TRIM35-203ENST00000521253 SCN5AQ14524 2016 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.34■■□□□ 1.33
TRIM35-203ENST00000521253 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.34■■□□□ 1.33
TRIM35-203ENST00000521253 POTEB3A0JP26 581 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 WDR64B1ANS9 1081 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 RBAK-RBAKDNI3L0D1 243 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 PSMD10O75832 226 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 CXCL10P02778 98 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 PSAPP07602 524 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 PDXDC2PQ6P474 469 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 POTEBQ6S5H4 581 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 TNPO1Q92973 898 aaKnown RBP23.34■■□□□ 1.33
TRIM35-203ENST00000521253 ZBTB10Q96DT7 871 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 C8orf76Q96K31 380 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 UNC45AQ9H3U1 944 aa23.34■■□□□ 1.33
TRIM35-203ENST00000521253 RRN3P2A6NIE6 340 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 ZBBXA8MT70 800 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 RSPH10B2B2RC85 870 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 CHMP2AO43633 222 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 CCNT1O60563 726 aaKnown RBP23.33■■□□□ 1.33
TRIM35-203ENST00000521253 CAND2O75155 1236 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 CTSHP09668 335 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 RSPH10BP0C881 870 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 ACTN1P12814 892 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 GCFC2P16383 781 aaKnown RBP23.33■■□□□ 1.33
TRIM35-203ENST00000521253 ATP4AP20648 1035 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 TAF2Q6P1X5 1199 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 Q7L0L9 218 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 ATP8B4Q8TF62 1192 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 TRAPPC12Q8WVT3 735 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 DISC1Q9NRI5 854 aa23.33■■□□□ 1.33
TRIM35-203ENST00000521253 MAFBQ9Y5Q3 323 aaPredicted RBP23.33■■□□□ 1.33
TRIM35-203ENST00000521253 GRXCR1A8MXD5 290 aa23.32■■□□□ 1.32
TRIM35-203ENST00000521253 FAM184AQ8NB25 1140 aa23.32■■□□□ 1.32
TRIM35-203ENST00000521253 TMX3Q96JJ7 454 aa23.32■■□□□ 1.32
TRIM35-203ENST00000521253 NAP1L4Q99733 375 aaKnown RBP23.32■■□□□ 1.32
TRIM35-203ENST00000521253 KCNMB3Q9NPA1 279 aa23.32■■□□□ 1.32
TRIM35-203ENST00000521253 GABBR1Q9UBS5 961 aa23.32■■□□□ 1.32
TRIM35-203ENST00000521253 SLC4A7Q9Y6M7 1214 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms