RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 SAMD11Q96NU1 681 aa23.22■■□□□ 1.31
PABPC1-217ENST00000521067 AGO3Q9H9G7 860 aaKnown RBP23.22■■□□□ 1.31
PABPC1-217ENST00000521067 FAM217BQ9NTX9 383 aaPredicted RBP23.22■■□□□ 1.31
PABPC1-217ENST00000521067 V9GY48 417 aaPredicted RBP23.22■■□□□ 1.31
PABPC1-217ENST00000521067 LEXMQ3ZCV2 418 aa23.21■■□□□ 1.31
PABPC1-217ENST00000521067 IL17RAQ96F46 866 aa23.21■■□□□ 1.31
PABPC1-217ENST00000521067 JPH1Q9HDC5 661 aaPredicted RBP23.21■■□□□ 1.31
PABPC1-217ENST00000521067 RIC8AQ9NPQ8 531 aa23.21■■□□□ 1.31
PABPC1-217ENST00000521067 SLC9A2Q9UBY0 812 aa23.21■■□□□ 1.31
PABPC1-217ENST00000521067 CDY2AQ9Y6F7 541 aa23.21■■□□□ 1.31
PABPC1-217ENST00000521067 STXBP3O00186 592 aa23.2■■□□□ 1.3
PABPC1-217ENST00000521067 NAPAP54920 295 aa23.2■■□□□ 1.3
PABPC1-217ENST00000521067 ITGB3BPQ13352 177 aaPredicted RBP23.2■■□□□ 1.3
PABPC1-217ENST00000521067 TSGA10IPQ3SY00 556 aa23.2■■□□□ 1.3
PABPC1-217ENST00000521067 SYNE3Q6ZMZ3 975 aa23.2■■□□□ 1.3
PABPC1-217ENST00000521067 DHX32Q7L7V1 743 aaKnown RBP23.2■■□□□ 1.3
PABPC1-217ENST00000521067 RTN4RL1Q86UN2 441 aaPredicted RBP23.2■■□□□ 1.3
PABPC1-217ENST00000521067 C1QTNF1Q9BXJ1 281 aa23.2■■□□□ 1.3
PABPC1-217ENST00000521067 RC3H2Q9HBD1 1191 aaKnown RBP23.2■■□□□ 1.3
PABPC1-217ENST00000521067 RBM28Q9NW13 759 aaKnown RBP23.2■■□□□ 1.3
PABPC1-217ENST00000521067 TMEM260Q9NX78 707 aa23.2■■□□□ 1.3
PABPC1-217ENST00000521067 CDC27P30260 824 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 ACTR2P61160 394 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 PLCB4Q15147 1175 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 RTN1Q16799 776 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 PTPROQ16827 1216 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 TCEAL5Q5H9L2 206 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 RSPH3Q86UC2 560 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 BANK1Q8NDB2 785 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 TRAPPC12Q8WVT3 735 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 LINC01599Q8WXQ3 324 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 FAM49AQ9H0Q0 323 aaPredicted RBP23.19■■□□□ 1.3
PABPC1-217ENST00000521067 AGO4Q9HCK5 861 aaKnown RBP23.19■■□□□ 1.3
PABPC1-217ENST00000521067 KAT6AQ92794 2004 aa23.19■■□□□ 1.3
PABPC1-217ENST00000521067 SMCO2A6NFE2 343 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 RRN3P2A6NIE6 340 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 MEIS1O00470 390 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 ADAMTS3O15072 1205 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 ZBTB43O43298 467 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 CD52P31358 61 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 MRPS6P82932 125 aaKnown RBP23.18■■□□□ 1.3
PABPC1-217ENST00000521067 CEP55Q53EZ4 464 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 RNF20Q5VTR2 975 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 TSHZ1Q6ZSZ6 1077 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 FIBCD1Q8N539 461 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 NEK9Q8TD19 979 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 ANO3Q9BYT9 981 aa23.18■■□□□ 1.3
PABPC1-217ENST00000521067 NFASCO94856 1347 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 COL4A6Q14031 1691 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 ATG7O95352 703 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 IL9P15248 144 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 BMPR1AP36894 532 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 CLK2P49760 499 aaKnown RBP23.17■■□□□ 1.3
PABPC1-217ENST00000521067 TMEM62Q0P6H9 643 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 FAM178BQ8IXR5 827 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 CRIPAKQ8N1N5 446 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 ZNF689Q96CS4 500 aaPredicted RBP23.17■■□□□ 1.3
PABPC1-217ENST00000521067 LRFN3Q9BTN0 628 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 BARHL2Q9NY43 387 aa23.17■■□□□ 1.3
PABPC1-217ENST00000521067 C5orf67F2Z3F1 127 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 H3BQ06 376 aaPredicted RBP23.16■■□□□ 1.3
PABPC1-217ENST00000521067 CCNE2O96020 404 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 FOSP01100 380 aaPredicted RBP23.16■■□□□ 1.3
PABPC1-217ENST00000521067 ADD1P35611 737 aaKnown RBP23.16■■□□□ 1.3
PABPC1-217ENST00000521067 STAT5BP51692 787 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 ADCY7P51828 1080 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 COL19A1Q14993 1142 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 PTCRAQ6ISU1 281 aaPredicted RBP23.16■■□□□ 1.3
PABPC1-217ENST00000521067 PPP1R18Q6NYC8 613 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 PLPPR4Q7Z2D5 763 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 SDF4Q9BRK5 362 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 AZI2Q9H6S1 392 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 C11orf16Q9NQ32 467 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 TRPC6Q9Y210 931 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 PCDHA2Q9Y5H9 948 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 C5orf42Q9H799 3197 aa23.16■■□□□ 1.3
PABPC1-217ENST00000521067 ADGRA3Q8IWK6 1321 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 KLF18A0A0U1RQI7 1052 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 GRXCR2A6NFK2 248 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 GOLGA8AA7E2F4 631 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 GOLGA8BA8MQT2 603 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 GRM6O15303 877 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 CPA1P15085 419 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 CTNNB1P35222 781 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 SREBF1P36956 1147 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 TIGD5Q53EQ6 642 aa23.15■■□□□ 1.3
PABPC1-217ENST00000521067 CLP1Q92989 425 aaKnown RBP23.15■■□□□ 1.3
PABPC1-217ENST00000521067 IGKV6D-21A0A0A0MT36 114 aa23.14■■□□□ 1.29
PABPC1-217ENST00000521067 FAM86B1E9PN63 330 aa23.14■■□□□ 1.29
PABPC1-217ENST00000521067 DGKIO75912 1065 aa23.14■■□□□ 1.29
PABPC1-217ENST00000521067 RB1P06400 928 aa23.14■■□□□ 1.29
PABPC1-217ENST00000521067 FAM86B2P0C5J1 330 aa23.14■■□□□ 1.29
PABPC1-217ENST00000521067 IER5Q5VY09 327 aa23.14■■□□□ 1.29
PABPC1-217ENST00000521067 PABPC5Q96DU9 382 aaKnown RBP23.14■■□□□ 1.29
PABPC1-217ENST00000521067 UIMC1Q96RL1 719 aa23.14■■□□□ 1.29
PABPC1-217ENST00000521067 NSUN3Q9H649 340 aaKnown RBP23.14■■□□□ 1.29
PABPC1-217ENST00000521067 TTC3P53804 2025 aa23.14■■□□□ 1.29
PABPC1-217ENST00000521067 PI4K2BG5E9Z4 385 aa23.13■■□□□ 1.29
PABPC1-217ENST00000521067 DHX15O43143 795 aaKnown RBP23.13■■□□□ 1.29
PABPC1-217ENST00000521067 LTBRP36941 435 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms