RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 CABP7Q86V35 215 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 ENAHQ8N8S7 591 aaPredicted RBP10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 LRRC45Q96CN5 670 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 GORASP1Q9BQQ3 440 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 CTDP1Q9Y5B0 961 aaPredicted RBP10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 KIF13AQ9H1H9 1805 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 PDS5AQ29RF7 1337 aaKnown RBP10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 CCNT1O60563 726 aaKnown RBP10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 KRT38O76015 456 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 ROR2Q01974 943 aaKnown RBP10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 DMPKQ09013 629 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 SLC9C1Q4G0N8 1177 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 CDCA2Q69YH5 1023 aaPredicted RBP10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 TTI2Q6NXR4 508 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 STX8Q9UNK0 236 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 PCDHGC5Q9Y5F6 944 aa10.98□□□□□ -0.65
PDGFRB-207ENST00000520579 FAM205AQ6ZU69 1335 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 TSPY2A6NKD2 308 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 E2F6O75461 281 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 RNF8O76064 485 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 CYP2D6P10635 497 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 KIF5BP33176 963 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 CASP7P55210 303 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 SFSWAPQ12872 951 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 RASGRF1Q13972 1273 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 DCAF17Q5H9S7 520 aaPredicted RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 ISLR2Q6UXK2 745 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 TRMT1LQ7Z2T5 733 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 PEX26Q7Z412 305 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 SGMS1Q86VZ5 419 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 SRBD1Q8N5C6 995 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 TTLL11Q8NHH1 800 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 CAVIN3Q969G5 261 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 TCP11L1Q9NUJ3 509 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 RFX7Q2KHR2 1363 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 FERP16591 822 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 LIFRP42702 1097 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 BYSLQ13895 437 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 GLE1Q53GS7 698 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 STAG2Q8N3U4 1231 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 SPATA5Q8NB90 893 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 EPS8L3Q8TE67 593 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 SPATA17Q96L03 361 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 BRD8Q9H0E9 1235 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 USH1CQ9Y6N9 552 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 LRRC10BA6NIK2 292 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 EPB41P11171 864 aaKnown RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 KCNQ4P56696 695 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 AADACL2Q6P093 401 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 CEP128Q6ZU80 1094 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 ABTB1Q969K4 478 aaPredicted RBP10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 CNNM2Q9H8M5 875 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 SUGT1Q9Y2Z0 365 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 TMEM2Q9UHN6 1383 aa10.97□□□□□ -0.65
PDGFRB-207ENST00000520579 OVOS2A0A0G2JMS6 1433 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 LRRD1A4D1F6 860 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 TCP11X1B4DZS4 312 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 F8W031 263 aaPredicted RBP10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 ACSL3O95573 720 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 KRT16P08779 473 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 DRD4P21917 467 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 CCNE1P24864 410 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 LACTBP83111 547 aaPredicted RBP10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 ATP2C1P98194 919 aaPredicted RBP10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 TXNRD1Q16881 649 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 VWA3BQ502W6 1294 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 MIS18BP1Q6P0N0 1132 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 C6orf89Q6UWU4 347 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 IFNL2Q8IZJ0 200 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 METTL5Q9NRN9 209 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 FBXO9Q9UK97 447 aaPredicted RBP10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 USP17L12C9JPN9 530 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 USP17L21D6R901 530 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 KRT18P05783 430 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 PDIA5Q14554 519 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 LRRC15Q8TF66 581 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 TMEM237Q96Q45 408 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 PAIP2BQ9ULR5 123 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 NOC2LQ9Y3T9 749 aaKnown RBP10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 NR2E1Q9Y466 385 aa10.96□□□□□ -0.65
PDGFRB-207ENST00000520579 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 FGGP02679 453 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 PHKG2P15735 406 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 CREB1P16220 341 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 DEUP1Q05D60 604 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 TRIP13Q15645 432 aaPredicted RBP10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 TRPM8Q7Z2W7 1104 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 VSIG1Q86XK7 387 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 WDR75Q8IWA0 830 aaKnown RBP10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 U2AF1L4Q8WU68 220 aaKnown RBP10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 DHRS1Q96LJ7 313 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 GALNT8Q9NY28 637 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 TMEM131LA2VDJ0 1609 aa10.96□□□□□ -0.66
PDGFRB-207ENST00000520579 MAP3K13O43283 966 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 SUPT3HO75486 399 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 RAD23BP54727 409 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 MIGA2Q7L4E1 593 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms