RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 PHOSPHO1Q8TCT1 267 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 ZCCHC14Q8WYQ9 949 aaKnown RBP4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 MFSD3Q96ES6 412 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 SLKQ9H2G2 1235 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 SLC6A20Q9NP91 592 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 INTS7Q9NVH2 962 aaKnown RBP4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 HSPBP1Q9NZL4 362 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 RBPJLQ9UBG7 517 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 ASH2LQ9UBL3 628 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 SBNO2Q9Y2G9 1366 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 WNT9AO14904 365 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 OPA1O60313 960 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 PLATP00750 562 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 ASLP04424 464 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 ZNF20P17024 532 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 KCNA6P17658 529 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 IGFALSP35858 605 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 TAF7LQ5H9L4 462 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 CYP4F22Q6NT55 531 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 ZNF662Q6ZS27 426 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 ZC3H7AQ8IWR0 971 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 TTLL11Q8NHH1 800 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 MBD6Q96DN6 1003 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 YTHDC1Q96MU7 727 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 MENTQ9BUN1 341 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 SSBP3Q9BWW4 388 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 MAGEC2Q9UBF1 373 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 INVSQ9Y283 1065 aa4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 TNPO3Q9Y5L0 923 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-212ENST00000520525 FAM83GA6ND36 823 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 C9orf118A6NHY6 69 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 KRIT1O00522 736 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 SLC27A2O14975 620 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 B4GALT3O60512 393 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 SLPIP03973 132 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 APPP05067 770 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 CKMP06732 381 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 SRGAP2CP0DJJ0 459 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 COL6A1P12109 1028 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 CANXP27824 592 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 KIAA2012Q0VF49 1180 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 ZNF460Q14592 562 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 HABP4Q5JVS0 413 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 PRAMEF18Q5VWM3 479 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 ABHD17CQ6PCB6 329 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 TMC5Q6UXY8 1006 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 OTOP3Q7RTS5 596 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 RBM12BQ8IXT5 1001 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 LGI4Q8N135 537 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 CLEC4DQ8WXI8 215 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 FBXW5Q969U6 566 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 SAMD11Q96NU1 681 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 TMEM209Q96SK2 561 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 KCNJ15Q99712 375 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 MRIQ9BWK5 157 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 TELO2Q9Y4R8 837 aa4.6□□□□□ -1.67
TRAPPC13-212ENST00000520525 A0A087X0B3 334 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 B4E1Z4 1266 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 NKRFO15226 690 aaKnown RBP eCLIP4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 MAFKO60675 156 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 NPTXRO95502 500 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 LTFP02788 710 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 PYGMP11217 842 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 GNAT1P11488 350 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 IL13P35225 146 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 MASP1P48740 699 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 FAM47CQ5HY64 1035 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 ZCCHC8Q6NZY4 707 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 PKN3Q6P5Z2 889 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 C16orf59Q7L2K0 433 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 LRRTM3Q86VH5 581 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 TTC9BQ8N6N2 239 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 UHMK1Q8TAS1 419 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 LCORQ96JN0 433 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 C8orf49Q96NF6 230 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 CLIC6Q96NY7 704 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 CELF4Q9BZC1 486 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 PDGFDQ9GZP0 370 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 CROTQ9UKG9 612 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 CBLCQ9ULV8 474 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 COQ6Q9Y2Z9 468 aa4.59□□□□□ -1.67
TRAPPC13-212ENST00000520525 CCDC66A2RUB6 948 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 GSTA4O15217 222 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 JMJD7P0C870 316 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 COL6A2P12110 1019 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 MYCLP1P12525 358 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 C6P13671 934 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 POU3F2P20265 443 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 FLT3P36888 993 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 ST5P78524 1137 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 GRIN1Q05586 938 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 SPIRE1Q08AE8 756 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 TUSC3Q13454 348 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 CDCA2Q69YH5 1023 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 CNNM4Q6P4Q7 775 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 BORAQ6PGQ7 559 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 DDX53Q86TM3 631 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 FAM124AQ86V42 546 aa4.58□□□□□ -1.68
TRAPPC13-212ENST00000520525 THNSL2Q86YJ6 484 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms