RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 SGMS1Q86VZ5 419 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 FANCBQ8NB91 859 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 DBF4BQ8NFT6 615 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 ADAMTS19Q8TE59 1207 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 ADAM33Q9BZ11 813 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 SETD4Q9NVD3 440 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 LMCD1Q9NZU5 365 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 COG5Q9UP83 839 aa12.67□□□□□ -0.38
IGHV1-17-201ENST00000520119 MICAL3Q7RTP6 2002 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 SPDYE3A6NKU9 549 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 MAFGO15525 162 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 AMHP03971 560 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 ERVK-21P61565 698 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 COL9A3Q14050 684 aaPredicted RBP12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 UTP14CQ5TAP6 766 aaKnown RBP12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 SYNE3Q6ZMZ3 975 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 TMTC3Q6ZXV5 915 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 SEPT8Q92599 483 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 TGS1Q96RS0 853 aaKnown RBP12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 UHRF1Q96T88 793 aaPredicted RBP12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 NPDC1Q9NQX5 325 aaPredicted RBP12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 INSL6Q9Y581 213 aa12.66□□□□□ -0.38
IGHV1-17-201ENST00000520119 NRCAMQ92823 1304 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 LINC01553A4QN01 128 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 LPXNO60711 386 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 BMP1P13497 986 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 ADAM17P78536 824 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 SP4Q02446 784 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 C6orf132Q5T0Z8 1188 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 KRT40Q6A162 431 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 FAM117BQ6P1L5 589 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 SPRED2Q7Z698 418 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 TRIM50Q86XT4 487 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 SEPT1Q8WYJ6 367 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 LRRC2Q9BYS8 371 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 EHMT1Q9H9B1 1298 aa12.65□□□□□ -0.38
IGHV1-17-201ENST00000520119 TCF20Q9UGU0 1960 aaKnown RBP12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 hCG_1642624A0A1W2PR95 340 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 ATP9AO75110 1047 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 CTSHP09668 335 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 KCNA2P16389 499 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 ITGB5P18084 799 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 TCF7P36402 384 aaPredicted RBP12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 HTRA4P83105 476 aaPredicted RBP12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 ARHGAP4P98171 946 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 TFF2Q03403 129 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 MTMR1Q13613 665 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 UBE2SQ16763 222 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 FAM26DQ5JW98 314 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 CENPQQ7L2Z9 268 aaPredicted RBP12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 HEATR3Q7Z4Q2 680 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 MYOCDQ8IZQ8 938 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 APBB2Q92870 758 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 HLA-CQ95604 372 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 SUGCTQ9HAC7 445 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 RBM28Q9NW13 759 aaKnown RBP12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 PCDHA6Q9UN73 950 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 TELO2Q9Y4R8 837 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 PCDHA8Q9Y5H6 950 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 UBIAD1Q9Y5Z9 338 aa12.64□□□□□ -0.39
IGHV1-17-201ENST00000520119 GSTTP1A0A1W2PQM5 241 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 ST18O60284 1047 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 FECHP22830 423 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 TSGA10IPQ3SY00 556 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 TAF2Q6P1X5 1199 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 APOA5Q6Q788 366 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 RSPH3Q86UC2 560 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 GDPD5Q8WTR4 605 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 TOP1MTQ969P6 601 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 SMARCAD1Q9H4L7 1026 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 JADE2Q9NQC1 790 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 ERAP1Q9NZ08 941 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 MTUS1Q9ULD2 1270 aa12.63□□□□□ -0.39
IGHV1-17-201ENST00000520119 SIP14410 1827 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 COL4A4P53420 1690 aaPredicted RBP12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 hCG_1984214I3L0E3 225 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 ZBTB43O43298 467 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 FOSP01100 380 aaPredicted RBP12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 KCNQ1P51787 676 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 KRT32Q14532 448 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 WWC2Q6AWC2 1192 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 PPP1R18Q6NYC8 613 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 ZNF713Q8N859 430 aaPredicted RBP12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 GLG1Q92896 1179 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 SAMD11Q96NU1 681 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 IFIH1Q9BYX4 1025 aaKnown RBP12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 RIC8AQ9NPQ8 531 aa12.62□□□□□ -0.39
IGHV1-17-201ENST00000520119 CNTNAP5Q8WYK1 1306 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms